RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
CIT-202ENST00000392520 TMEM65Q6PI78 240 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 VSTM2AQ8TAG5 236 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 GPBAR1Q8TDU6 330 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 DTD1Q8TEA8 209 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 RPEQ96AT9 228 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 COX14Q96I36 57 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 MAP1LC3CQ9BXW4 147 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 ZFP64Q9NPA5 681 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 THYN1Q9P016 225 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 SPAG17Q6Q759 2223 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 PRSS1P07477 247 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 RPS4XP62701 263 aaKnown RBP13.17□□□□□ -0.3
CIT-202ENST00000392520 IL11RAQ14626 422 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 ZNF766Q5HY98 468 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
CIT-202ENST00000392520 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 IGHV5-51A0A0C4DH38 117 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 hADV38S2A0JD32 116 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 SRD5A2P31213 254 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 TRA2AQ13595 282 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■□□□□ 10.6
CIT-202ENST00000392520 KHDC3LQ587J8 217 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 SPINK9Q5DT21 86 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 ABLIM2Q6H8Q1 611 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 OR10D3Q8NH80 312 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 ASB5Q8WWX0 329 aa13.17□□□□□ -0.3
CIT-202ENST00000392520 A6NDN8 102 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 PPP1CAP62136 330 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 ZNF880Q6PDB4 577 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 TMEM251Q8N6I4 163 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 LPAR5Q9H1C0 372 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 ZNF552Q9H707 407 aaPredicted RBP13.16□□□□□ -0.3
CIT-202ENST00000392520 COL22A1Q8NFW1 1626 aaPredicted RBP13.16□□□□□ -0.3
CIT-202ENST00000392520 TRAV8-7A0A075B6U6 113 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 GEMIN2O14893 280 aaKnown RBP13.16□□□□□ -0.3
CIT-202ENST00000392520 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
CIT-202ENST00000392520 ZNF260Q3ZCT1 412 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 NSUN5P2Q63ZY6 315 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 LRRC29Q8WV35 223 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 SERGEFQ9UGK8 458 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
CIT-202ENST00000392520 CISD3P0C7P0 127 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 SMAD4Q13485 552 aaKnown RBP13.16□□□□□ -0.3
CIT-202ENST00000392520 GAPTQ8N292 157 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 OR1L6Q8NGR2 347 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 PTX4Q96A99 478 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 HSD17B10Q99714 261 aaKnown RBP13.16□□□□□ -0.3
CIT-202ENST00000392520 WASHC3Q9Y3C0 194 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 IGHV3-43A0A0B4J1X8 118 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 IGHV3-43DP0DP04 118 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 B2MP61769 119 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 DOK5Q9P104 306 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 MKRN2OSH3BPM6 223 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 CD99P14209 185 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 TCL1AP56279 114 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 EIF4E3Q8N5X7 224 aaKnown RBP13.16□□□□□ -0.3
CIT-202ENST00000392520 NRIP2Q9BQI9 281 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 IER2Q9BTL4 223 aa13.16□□□□□ -0.3
CIT-202ENST00000392520 TRAV17A0A0B4J275 112 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 CTXND1A0A1B0GTU2 59 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 LYPD8Q6UX82 237 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 TMEM116Q8NCL8 245 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 VSTM2LQ96N03 204 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 CA10Q9NS85 328 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 A0A1B0GU03 582 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 CSN3P07498 182 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 CTGFP29279 349 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 PSG6Q00889 435 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 FBXO17Q96EF6 278 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 GHITMQ9H3K2 345 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 VSIG8P0DPA2 414 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 ORM2P19652 201 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 RAC3P60763 192 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 PSG5Q15238 335 aa13.15□□□□□ -0.3
CIT-202ENST00000392520 IGHV1OR21-1A0A087WYE8 117 aa13.15□□□□□ -0.31
CIT-202ENST00000392520 IGSF23A1L1A6 192 aa13.15□□□□□ -0.31
CIT-202ENST00000392520 CD1AP06126 327 aa13.15□□□□□ -0.31
CIT-202ENST00000392520 DEFB109BQ30KR1 87 aa13.15□□□□□ -0.31
CIT-202ENST00000392520 FDX2Q6P4F2 183 aa13.15□□□□□ -0.31
CIT-202ENST00000392520 CXXC4Q9H2H0 198 aa13.15□□□□□ -0.31
CIT-202ENST00000392520 P4HTMQ9NXG6 502 aa13.15□□□□□ -0.31
CIT-202ENST00000392520 F5H697 171 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 PAGE4O60829 102 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 NMBP08949 121 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 GZMMP51124 257 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 MMP16P51512 607 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 RIGQ13278 110 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 ACER2Q5QJU3 275 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 ADAD2Q8NCV1 583 aaKnown RBP13.14□□□□□ -0.31
CIT-202ENST00000392520 CADM4Q8NFZ8 388 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 MRPL30Q8TCC3 161 aaKnown RBP13.14□□□□□ -0.31
CIT-202ENST00000392520 SF3B5Q9BWJ5 86 aaKnown RBP13.14□□□□□ -0.31
CIT-202ENST00000392520 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
CIT-202ENST00000392520 SH2D7A6NKC9 451 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms