RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 FAM90A18PA6NE21 464 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 FAM90A16PA6NEW6 464 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 FAM183AA6NL82 134 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 OR4C45A6NMZ5 311 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 GJE1A6NN92 205 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 FAM90A9PA6NNJ1 464 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 ZNF724A8MTY0 619 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 FAM90A5PA8MXJ8 464 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 LDLRAD4O15165 306 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 TCAPO15273 167 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 NTN1O95631 604 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 TSPAN15O95858 294 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 THY1P04216 161 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 FAM90A15PP0C7V4 464 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 FAM90A14PP0C7W9 464 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 NQO2P16083 231 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 SNCAP37840 140 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 APOBEC1P41238 236 aaKnown RBP6.47□□□□□ -1.37
TRBV28-201ENST00000390400 POU3F4P49335 361 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 B3GALT5-AS1P59052 145 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 H3F3AP84243 136 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 SPOCK1Q08629 439 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 JOSD1Q15040 202 aaPredicted RBP6.47□□□□□ -1.37
TRBV28-201ENST00000390400 PPA1Q15181 289 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 C1orf100Q5SVJ3 147 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 GPR157Q5UAW9 335 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 ABLIM2Q6H8Q1 611 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 PCSK4Q6UW60 755 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 DPPA3Q6W0C5 159 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 SLC35E3Q7Z769 313 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 ZFP82Q8N141 532 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 Q8N3U1 123 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 ZNF433Q8N7K0 673 aaPredicted RBP6.47□□□□□ -1.37
TRBV28-201ENST00000390400 OR13C8Q8NGS7 320 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 OR10R2Q8NGX6 335 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 SLC25A43Q8WUT9 341 aaPredicted RBP6.47□□□□□ -1.37
TRBV28-201ENST00000390400 TMEM171Q8WVE6 324 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 TMED6Q8WW62 240 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 HPSE2Q8WWQ2 592 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 MAFIPQ8WZ33 124 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 AQP3Q92482 292 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 S100PBPQ96BU1 408 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 C2orf50Q96LR7 162 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 TBX5Q99593 518 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 NAA11Q9BSU3 229 aaPredicted RBP6.47□□□□□ -1.37
TRBV28-201ENST00000390400 DEFB127Q9H1M4 99 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 MRPL15Q9P015 296 aaKnown RBP6.47□□□□□ -1.37
TRBV28-201ENST00000390400 CLEC4AQ9UMR7 237 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 TMED7Q9Y3B3 224 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 FBXO7Q9Y3I1 522 aa6.47□□□□□ -1.37
TRBV28-201ENST00000390400 TRAV18A0A075B6X5 111 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 A8MVM7 634 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 PPP5D1E7EU14 171 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 CA11O75493 328 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 MED6O75586 246 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 UPK3AO75631 287 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 IGHG3P01860 377 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 CHRM2P08172 466 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 DANCRP0C864 163 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 CBR1P16152 277 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 IL11P20809 199 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 PTNP21246 168 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 FKBP2P26885 142 aaKnown RBP6.46□□□□□ -1.38
TRBV28-201ENST00000390400 RPS4XP62701 263 aaKnown RBP6.46□□□□□ -1.38
TRBV28-201ENST00000390400 PLA2G7Q13093 441 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 IL15RAQ13261 267 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 MELKQ14680 651 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 ACSF3Q4G176 576 aaPredicted RBP6.46□□□□□ -1.38
TRBV28-201ENST00000390400 TP53I3Q53FA7 332 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 KRTCAP3Q53RY4 240 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 PRR30Q53SZ7 412 aaPredicted RBP6.46□□□□□ -1.38
TRBV28-201ENST00000390400 MTFR2Q6P444 385 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 TMEM108Q6UXF1 575 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 SSX6Q7RTT6 188 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 HOGA1Q86XE5 327 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 ZNF383Q8NA42 475 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 DDIT4LQ96D03 193 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 SNRNP40Q96DI7 357 aaKnown RBP6.46□□□□□ -1.38
TRBV28-201ENST00000390400 RNF126Q9BV68 326 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 HCAR1Q9BXC0 346 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 GPR61Q9BZJ8 451 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 RAB22AQ9UL26 194 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 SHANK1Q9Y566 2161 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 LIPGQ9Y5X9 500 aa6.46□□□□□ -1.38
TRBV28-201ENST00000390400 PCNX1Q96RV3 2341 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 KMT2BQ9UMN6 2715 aaPredicted RBP6.45□□□□□ -1.38
TRBV28-201ENST00000390400 IGKV1D-42A0A075B6H8 117 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 TRAV36DV7A0A075B6V5 113 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 SMCO3A2RU48 225 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 A6NLC8 198 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 A8MWP6 167 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 EFNA2O43921 213 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 DFFBO76075 338 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 OR2C1O95371 312 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 AHSA1O95433 338 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 SFT2D2O95562 160 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 OPN1LWP04000 364 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 HSPB1P04792 205 aaKnown RBP6.45□□□□□ -1.38
TRBV28-201ENST00000390400 ISG15P05161 165 aa6.45□□□□□ -1.38
TRBV28-201ENST00000390400 ADRA2CP18825 462 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms