RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SPAARA0A1B0GVQ0 90 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 CRYM-AS1A6NIL9 109 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 A8MXK9 166 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 SIGLEC5O15389 551 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 ACTL6AO96019 429 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 PIGPP57054 158 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 MALLQ13021 153 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 MYPOPQ86VE0 399 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 TMEM200AQ86VY9 491 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 BOLLQ8N9W6 283 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 BVESQ8NE79 360 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 PIK3IP1Q96FE7 263 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 C2orf50Q96LR7 162 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 SLC25A32Q9H2D1 315 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF442Q9H7R0 627 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 CYTL1Q9NRR1 136 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF175Q9Y473 711 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 DMRT1Q9Y5R6 373 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF318Q5VUA4 2279 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF732B4DXR9 585 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 PRSS44E7EML9 344 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 ATP6V1G2-DDX39BF2Z307 99 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 WT1P19544 449 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 FUT3P21217 361 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 DUSP1P28562 367 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 FCGR2CP31995 323 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 PRSS54Q6PEW0 395 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 PIP4P1Q86T03 277 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 SGPP2Q8IWX5 399 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 OR11L1Q8NGX0 322 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 MRPL24Q96A35 216 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 TECTBQ96PL2 329 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 A0A1W2PR80 420 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 SLC22A20A6NK97 555 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 HSPB6O14558 160 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 SYNGR1O43759 233 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF728P0DKX0 622 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 COX5BP10606 129 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 LYL1P12980 280 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ZP3P21754 424 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ARR3P36575 388 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 RBMXP38159 391 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 NOVA1P51513 510 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 S100A10P60903 97 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 SNTB1Q13884 538 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 CEACAM21Q3KPI0 293 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 PHLDA2Q53GA4 152 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ELP2Q6IA86 826 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ZDHHC23Q8IYP9 409 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 Q8NFD4 153 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 OR1K1Q8NGR3 316 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF488Q96MN9 340 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 MS4A7Q9GZW8 240 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 TINAGQ9UJW2 476 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 NUP50Q9UKX7 468 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 KLF2Q9Y5W3 355 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 CD300LBA8K4G0 201 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 RNF223E7ERA6 249 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 OR5AC1P0C628 307 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 FTH1P19P0C7X4 201 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 TNFSF10P50591 281 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 CCL11P51671 97 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 IAH1Q2TAA2 248 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 PAN3Q58A45 887 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 SPATA46Q5T0L3 261 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 MDP1Q86V88 176 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 EXTL1Q92935 676 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ZDHHC11Q9H8X9 412 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 C1orf123Q9NWV4 160 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 SVILO95425 2214 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 CDRT15L2A8MXV6 281 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 CST4P01036 141 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 CELA3BP08861 270 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 AADACP22760 399 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 NUP62P37198 522 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ECI1P42126 302 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 PLP2Q04941 152 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 FBXW9Q5XUX1 488 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 GGNBP1Q5YKI7 109 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 HSD17B13Q7Z5P4 300 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 GCNT2Q8N0V5 402 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 FDCSPQ8NFU4 85 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 RTN4IP1Q8WWV3 396 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 BCL2L2Q92843 193 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 ZNF286AQ9HBT8 521 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 PTPRBP23467 1997 aa6.82□□□□□ -1.32
PDLIM5-204ENST00000380176 CNOT4O95628 575 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 SOX8P57073 446 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 FGF12P61328 243 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 TMEM187Q14656 261 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 TSC22D1Q15714 1073 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 TMEM211Q6ICI0 200 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 OR2T2Q6IF00 324 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 OR2A2Q6IF42 318 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 CLEC2AQ6UVW9 174 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 OR5L1Q8NGL2 311 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 PHYHIPLQ96FC7 376 aa6.81□□□□□ -1.32
PDLIM5-204ENST00000380176 LRFN3Q9BTN0 628 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms