RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SSPNQ14714 243 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 SWI5Q1ZZU3 235 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 TMEM105Q8N8V8 129 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 EXTL1Q92935 676 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 GPHA2Q96T91 129 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 TMED3Q9Y3Q3 217 aa9.4□□□□□ -0.91
BEST1-201ENST00000378043 KNTC1P50748 2209 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 IGKV3D-15A0A087WSY6 115 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 C3orf85A0A1B0GTC6 90 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 NKX2-6A6NCS4 301 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 RPL36A-HNRNPH2H7BZ11 118 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 GLAP06280 429 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 PPT1P50897 306 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 HERV-K104P61576 105 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 HERPUD1Q15011 391 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 NRN1LQ496H8 165 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 SLAMF9Q96A28 289 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 CDX2Q99626 313 aaPredicted RBP9.39□□□□□ -0.91
BEST1-201ENST00000378043 PAPOLGQ9BWT3 736 aaKnown RBP9.39□□□□□ -0.91
BEST1-201ENST00000378043 TMEM222Q9H0R3 208 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 NOSIPQ9Y314 301 aaKnown RBP9.39□□□□□ -0.91
BEST1-201ENST00000378043 KMT2EQ8IZD2 1858 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 MED19A0JLT2 244 aaPredicted RBP9.39□□□□□ -0.91
BEST1-201ENST00000378043 MRPL33O75394 65 aaKnown RBP9.39□□□□□ -0.91
BEST1-201ENST00000378043 NEURL1O76050 574 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 TSPAN15O95858 294 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 NAPSAO96009 420 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 HLA-HP01893 362 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 SCTP09683 121 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 CCNOP22674 350 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 AKR1C3P42330 323 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 LHX2P50458 406 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 ZXDAP98168 799 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 SRYQ05066 204 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 PEA15Q15121 130 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 BOD1Q96IK1 185 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 SIGLEC12Q96PQ1 595 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 MTCH1Q9NZJ7 389 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 LRFN1Q9P244 771 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 RFNGQ9Y644 331 aa9.39□□□□□ -0.91
BEST1-201ENST00000378043 CFAP47Q6ZTR5 3102 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 BORCS7-ASMTA0A0B4J1R7 106 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 HAAOP46952 286 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 GPM6AP51674 278 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 ZNF616Q08AN1 781 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 PRDX4Q13162 271 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 C6orf15Q6UXA7 325 aaPredicted RBP9.38□□□□□ -0.91
BEST1-201ENST00000378043 Q6ZS49 121 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 CCDC71LQ8N9Z2 235 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 HSD17B11Q8NBQ5 300 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 HES7Q9BYE0 225 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 Q9N2K0 584 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 LOXL2Q9Y4K0 774 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 ARHGAP21Q5T5U3 1957 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 IGKV1D-13A0A0B4J2D9 117 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 IGKV1-13P0DP09 117 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 HOXA1P49639 335 aaPredicted RBP9.38□□□□□ -0.91
BEST1-201ENST00000378043 CLDN18P56856 261 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 EWSR1Q01844 656 aaKnown RBP eCLIP9.38□□□□□ -0.91
BEST1-201ENST00000378043 GUK1Q16774 197 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 AVPI1Q5T686 147 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 ZNF818PQ6ZRF7 136 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 TBC1D26Q86UD7 250 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 TUSC5Q8IXB3 177 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 ZFP82Q8N141 532 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 C2CD4CQ8TF44 421 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 POM121Q96HA1 1249 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 TMEM56Q96MV1 263 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 CLCC1Q96S66 551 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 ZNF703Q9H7S9 590 aaPredicted RBP9.38□□□□□ -0.91
BEST1-201ENST00000378043 ATPIF1Q9UII2 106 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 TMEM56-RWDD3S4R434 201 aa9.38□□□□□ -0.91
BEST1-201ENST00000378043 IGKV1-6A0A0C4DH72 117 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 C5orf49A4QMS7 147 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A10PA6NDY2 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A18PA6NE21 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A16PA6NEW6 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A20PA6NIJ5 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A8PA6NJQ4 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A7PA6NKC0 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A22PA8MWA6 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A12PA8MX19 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A5PA8MXJ8 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A23PA8MXZ1 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 TRDCB7Z8K6 153 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 LAMTOR5O43504 91 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 NGFP01138 241 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A15PP0C7V4 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A13PP0C7W8 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A14PP0C7W9 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 FAM90A24PP0C7X0 464 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 ACP1P24666 158 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 RPL35P42766 123 aaKnown RBP9.37□□□□□ -0.91
BEST1-201ENST00000378043 FGF12P61328 243 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 TSC22D1Q15714 1073 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 SUMF1Q8NBK3 374 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 OR2M7Q8NG81 312 aa9.37□□□□□ -0.91
BEST1-201ENST00000378043 LILRB1Q8NHL6 650 aaPredicted RBP9.37□□□□□ -0.91
BEST1-201ENST00000378043 THOC3Q96J01 351 aaKnown RBP9.37□□□□□ -0.91
BEST1-201ENST00000378043 LINC00470Q9BZP3 86 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms