RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 CLRN1P58418 232 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 RPS15P62841 145 aaKnown RBP10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 SRSF4Q08170 494 aaKnown RBP10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 RSPO4Q2I0M5 234 aaPredicted RBP10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 C1orf194Q5T5A4 169 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ZNF660Q6AZW8 331 aaPredicted RBP10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 TMEM225Q6GV28 225 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 IZUMO1Q8IYV9 350 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 JAGN1Q8N5M9 183 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 SMIM4Q8WVI0 70 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 TOMM40LQ969M1 308 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 SLC6A7Q99884 636 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 SSBP4Q9BWG4 385 aaPredicted RBP10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 FAM206AQ9NX38 181 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 STEAP1Q9UHE8 339 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 FOXJ3Q9UPW0 622 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 EMC9Q9Y3B6 208 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 LHFPL6Q9Y693 200 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 EML6Q6ZMW3 1958 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 LOC101059948A0A1B0GTJ6 334 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 OR5H14A6NHG9 310 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 LRRC3CA6NJW4 275 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 RNF212BA8MTL3 300 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 G3V3Q6 166 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ADAM20O43506 726 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ZNF43P17038 809 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 RAB6AP20340 208 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ACHEP22303 614 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ZBTB25P24278 435 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 CTSSP25774 331 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 DNASE1L1P49184 302 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 MMP16P51512 607 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ZNF133P52736 654 aaPredicted RBP10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 KLF9Q13886 244 aaPredicted RBP10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 CLINT1Q14677 625 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 TMEM255AQ5JRV8 349 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 RAET1LQ5VY80 246 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ZNF562Q6V9R5 426 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 PRSS45Q7RTY3 260 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 TMPRSS12Q86WS5 348 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 BPIFB2Q8N4F0 458 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 TMEM185AQ8NFB2 350 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 SYNPRQ8TBG9 265 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 RAB40AQ8WXH6 277 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ARL11Q969Q4 196 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 SLAMF6Q96DU3 332 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 ZFP3Q96NJ6 502 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 TMUB1Q9BVT8 246 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 DPAGT1Q9H3H5 408 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 SEC61A2Q9H9S3 476 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 HRASLSQ9HDD0 168 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 TMEM9BQ9NQ34 198 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 DHDHQ9UQ10 334 aa10.85□□□□□ -0.67
CEACAM1-205ENST00000377806 PCNX2A6NKB5 2137 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 F8WDY8 70 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 MT-CO3P00414 261 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 HPRT1P00492 218 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 CD5P06127 495 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 ANXA2P07355 339 aaKnown RBP10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 CST2P09228 141 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 CXCL2P19875 107 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 TNFSF4P23510 183 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 SRD5A2P31213 254 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 RAB7AP51149 207 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 SEC61A1P61619 476 aaKnown RBP10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 MORN2Q502X0 79 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 TCTEX1D4Q5JR98 221 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 STEAP1BQ6NZ63 245 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 DNM1P46Q6ZS02 220 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 SIAH3Q8IW03 269 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 NECAP1Q8NC96 275 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 TMEM54Q969K7 222 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 GALNT14Q96FL9 552 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 JSRP1Q96MG2 331 aaPredicted RBP10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 TP53RKQ96S44 253 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 NAA11Q9BSU3 229 aaPredicted RBP10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 C1orf198Q9H425 327 aa10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 AURKAIP1Q9NWT8 199 aaPredicted RBP10.84□□□□□ -0.67
CEACAM1-205ENST00000377806 WDFY3Q8IZQ1 3526 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 LOC105371242A0A075B767 164 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 A0A0J9YW62 118 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 LOC107986453A0A1B0GWG9 222 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 DCDC2BA2VCK2 349 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 H2BFMP0C1H6 154 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 ACKR3P25106 362 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 CDAP32320 146 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 ART1P52961 327 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 CLDN17P56750 224 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 IQCJQ1A5X6 159 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 LYPD6Q86Y78 171 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 BEST3Q8N1M1 668 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 OR4S1Q8NGB4 309 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 SLC25A28Q96A46 364 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 RAX2Q96IS3 184 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 PLEKHA2Q9HB19 425 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 DEPPQ9NTK1 212 aa10.83□□□□□ -0.68
CEACAM1-205ENST00000377806 TAS2R4Q9NYW5 299 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms