RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 PTPMT1Q8WUK0 201 aaPredicted RBP7.97□□□□□ -1.13
CRNKL1-201ENST00000377327 NUDT16L1Q9BRJ7 211 aaKnown RBP7.97□□□□□ -1.13
CRNKL1-201ENST00000377327 HDHD3Q9BSH5 251 aaPredicted RBP7.97□□□□□ -1.13
CRNKL1-201ENST00000377327 ZNF665Q9H7R5 613 aa7.97□□□□□ -1.13
CRNKL1-201ENST00000377327 GNG12Q9UBI6 72 aa7.97□□□□□ -1.13
CRNKL1-201ENST00000377327 ERRFI1Q9UJM3 462 aaPredicted RBP7.97□□□□□ -1.13
CRNKL1-201ENST00000377327 CRYM-AS1A6NIL9 109 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 TBX6O95947 436 aaPredicted RBP7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 CD38P28907 300 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 HOXA6P31267 233 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 MRPS21P82921 87 aaKnown RBP7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 PYY3Q5JQD4 70 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 KIAA0895LQ68EN5 471 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 CCDC74BQ96LY2 380 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 FAM60AQ9NP50 221 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 P4HTMQ9NXG6 502 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 GOLGB1Q14789 3259 aaKnown RBP7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 A0A087WWC5 75 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 A0A1W2PPE3 182 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 G3V3Y1 287 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 PAFAH1B2P68402 229 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 WDR25Q64LD2 544 aaPredicted RBP7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 Q8WTZ3 238 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 GINS3Q9BRX5 216 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 SRD5A3Q9H8P0 318 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 TUBD1Q9UJT1 453 aa7.96□□□□□ -1.13
CRNKL1-201ENST00000377327 RBBP6Q7Z6E9 1792 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 GBF1Q92538 1859 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 LNP1A1A4G5 178 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 SHISA8B8ZZ34 492 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 C11orf94C9JXX5 98 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BKO60814 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 ZNF217O75362 1048 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BJP06899 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BOP23527 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BBP33778 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 CDC34P49427 236 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BDP58876 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BCP62807 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 SERF2P84101 59 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 SRSF5Q13243 272 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST2H2BEQ16778 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 LTC4SQ16873 150 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HEPN1Q6WQI6 88 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 OR5B3Q8NH48 314 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 RLN3Q8WXF3 142 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BHQ93079 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BNQ99877 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 HIST1H2BMQ99879 126 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 PISDQ9UG56 409 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 PCOLCE2Q9UKZ9 415 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 IGLV1-36A0A0B4J1U3 117 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 H3BMH7 237 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 RAMP1O60894 148 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 ZNF253O75346 499 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 ZNF735P0CB33 412 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 CAPZBP47756 277 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 SHHQ15465 462 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 PLAC9Q5JTB6 97 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 PRAMEF5Q5TYX0 476 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 PRAMEF6Q5VXH4 476 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 SYT13Q7L8C5 426 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 CLDN23Q96B33 292 aa7.96□□□□□ -1.14
CRNKL1-201ENST00000377327 COL4A5P29400 1685 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 ZNF638Q14966 1978 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 LOC390937A0A1W2PQ73 354 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 TMEM14DPA8MWL7 114 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 SPINK4O60575 86 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 DXOO77932 396 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 MYOGP15173 224 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 HERPUD1Q15011 391 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 ATP6V1FQ16864 119 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 DGAT2L6Q6ZPD8 337 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 C22orf15Q8WYQ4 148 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 TP53RKQ96S44 253 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 P2RX4Q99571 388 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 KLF2Q9Y5W3 355 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 NYNRINQ9P2P1 1898 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 DBX1A6NMT0 343 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 GYPAP02724 150 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 TMEM50BP56557 158 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 C1QL4Q86Z23 238 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 GAPTQ8N292 157 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 CISD2Q8N5K1 135 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 ZNF738Q8NE65 137 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 GTF3AQ92664 365 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 RAB9BQ9NP90 201 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 PAGE4O60829 102 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 SRP19P09132 144 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 CTGFP29279 349 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 OTX2P32243 289 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 ARL3P36405 182 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 DCDP81605 110 aaKnown RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 MEF2BQ02080 365 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 HLA-DRB5Q30154 266 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 FHL5Q5TD97 284 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 GTF2H5Q6ZYL4 71 aa7.95□□□□□ -1.14
CRNKL1-201ENST00000377327 OR1F12Q8NHA8 337 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms