RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PACRGQ96M98 296 aaPredicted RBP11.11□□□□□ -0.63
VPS13A-204ENST00000376634 ERRFI1Q9UJM3 462 aaPredicted RBP11.11□□□□□ -0.63
VPS13A-204ENST00000376634 KCNMB2Q9Y691 235 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 FAM157AC9JC47 383 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 GUCA2AQ02747 115 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 OR2I1PQ8NGU4 316 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 VSTM2AQ8TAG5 236 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 COPS9Q8WXC6 57 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 IZUMO4Q1ZYL8 232 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 TMUB1Q9BVT8 246 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 SLC25A37Q9NYZ2 338 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 AMDHD2Q9Y303 409 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 CLDN34H7C241 214 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 OR5AC1P0C628 307 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 ZNF764Q96H86 408 aaPredicted RBP11.11□□□□□ -0.63
VPS13A-204ENST00000376634 CYB5R1Q9UHQ9 305 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 C2orf16Q68DN1 1984 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 KIR3DL2P43630 455 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 ZNF774Q6NX45 483 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 MCHR2Q969V1 340 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 YIPF6Q96EC8 236 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 MAP6Q96JE9 813 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 GABRG3Q99928 467 aa11.11□□□□□ -0.63
VPS13A-204ENST00000376634 AKIRIN1Q9H9L7 192 aaPredicted RBP11.11□□□□□ -0.63
VPS13A-204ENST00000376634 TRAV38-1A0A0B4J264 116 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 UBE2L6O14933 153 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 FAM78BQ5VT40 261 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 C20orf196Q8IYI0 205 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 ADTRPQ96IZ2 230 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 SPOCK3Q9BQ16 436 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 ZNF552Q9H707 407 aaPredicted RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 SMIM6P0DI80 62 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 RELBQ01201 579 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 ASCL5Q7RTU5 278 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 OR8B3Q8NGG8 313 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 OR8B2Q96RD0 313 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 ELOVL1Q9BW60 279 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 CYSLTR2Q9NS75 346 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 USF3Q68DE3 2245 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 HLA-GP17693 338 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 ID1P41134 155 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 HLA-BQ31612 363 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 FADS6Q8N9I5 356 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 FLYWCH2Q96CP2 140 aaKnown RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 SCMH1Q96GD3 660 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 HCFC1P51610 2035 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 C19orf57Q0VDD7 668 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 HIST3H3Q16695 136 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 MYOZ3Q8TDC0 251 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 MRGPRX3Q96LB0 322 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 FGF20Q9NP95 211 aaPredicted RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 TMEM167BQ9NRX6 74 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 GSTZ1O43708 216 aaPredicted RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 HIST1H1DP16402 221 aaKnown RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 PKIAP61925 76 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 OR2D3Q8NGH3 330 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 OR2T10Q8NGZ9 312 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 CCL4L1Q8NHW4 92 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 FOXB1Q99853 325 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 CSN3P07498 182 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 COL5A1-AS1Q5SY13 56 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 SPEM1Q8N4L4 309 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 TECRQ9NZ01 308 aaKnown RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 OR5B21A6NL26 309 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 CORTO00230 105 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 DHHO43323 396 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 TNXAQ16473 311 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 CST9Q5W186 159 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 OTPQ5XKR4 325 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 KIRREL2Q6UWL6 708 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 MAFAQ8NHW3 353 aaPredicted RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 PRRX2Q99811 253 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 UBTD1Q9HAC8 227 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 LTB4R2Q9NPC1 389 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 AHDC1Q5TGY3 1603 aaPredicted RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 CLDN18P56856 261 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 IGSF11Q5DX21 431 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 RAB1CQ92928 201 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 SNRNP40Q96DI7 357 aaKnown RBP11.1□□□□□ -0.63
VPS13A-204ENST00000376634 LRRC61Q9BV99 259 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 OR2J1Q9GZK6 312 aa11.1□□□□□ -0.63
VPS13A-204ENST00000376634 K7ERU9 68 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 SOCS7O14512 581 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 PRKNO60260 465 aaPredicted RBP11.09□□□□□ -0.63
VPS13A-204ENST00000376634 PPP1CCP36873 323 aaKnown RBP11.09□□□□□ -0.63
VPS13A-204ENST00000376634 GNG7O60262 68 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 PNRC1Q12796 327 aaPredicted RBP11.09□□□□□ -0.63
VPS13A-204ENST00000376634 OR10G4Q8NGN3 311 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 OR10G9Q8NGN4 311 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 OR10G7Q8NGN6 311 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 LRRC29Q8WV35 223 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 VSIG4Q9Y279 399 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 DYNLT3P51808 116 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 LIAT1Q6ZQX7 453 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 AGERQ15109 404 aa11.09□□□□□ -0.63
VPS13A-204ENST00000376634 ADIPOQQ15848 244 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms