RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 OR2B8PP59922 312 aa9.66□□□□□ -0.86
HDAC6-203ENST00000376619 Q0VFX4 171 aa9.66□□□□□ -0.86
HDAC6-203ENST00000376619 OR2F1Q13607 317 aa9.66□□□□□ -0.86
HDAC6-203ENST00000376619 BIVMQ86UB2 503 aa9.66□□□□□ -0.86
HDAC6-203ENST00000376619 SPSB1Q96BD6 273 aa9.66□□□□□ -0.86
HDAC6-203ENST00000376619 AKR1E2Q96JD6 320 aa9.66□□□□□ -0.86
HDAC6-203ENST00000376619 FBXL17Q9UF56 701 aa9.66□□□□□ -0.86
HDAC6-203ENST00000376619 IFNA4P05014 189 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 NHLH2Q02577 135 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 THNSL2Q86YJ6 484 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 GAPTQ8N292 157 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 BPIFCQ8NFQ6 507 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 MRPL13Q9BYD1 178 aaKnown RBP9.65□□□□□ -0.86
HDAC6-203ENST00000376619 KIF25Q9UIL4 384 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 PURGQ9UJV8 347 aaKnown RBP9.65□□□□□ -0.86
HDAC6-203ENST00000376619 WASF3Q9UPY6 502 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 MSGN1A6NI15 193 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 SFT2D2O95562 160 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 RAG2P55895 527 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 SSTP61278 116 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 C5orf66Q9H5L9 145 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 SLC2A9Q9NRM0 540 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 GPR27Q9NS67 375 aa9.65□□□□□ -0.86
HDAC6-203ENST00000376619 USP9YO00507 2555 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-203ENST00000376619 IGHV3OR15-7A0A075B7D8 119 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 TERTO14746 1132 aaKnown RBP9.65□□□□□ -0.87
HDAC6-203ENST00000376619 IFNA10P01566 189 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 CELA3BP08861 270 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 CEACAM6P40199 344 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 FHITP49789 147 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 PDZD11Q5EBL8 140 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 CLLU1Q5K131 121 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 FAM58AQ8N1B3 248 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 SPICQ8N5J4 248 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 CPEB3Q8NE35 698 aaKnown RBP9.65□□□□□ -0.87
HDAC6-203ENST00000376619 CNTNAP3Q9BZ76 1288 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 SPACA1Q9HBV2 294 aa9.65□□□□□ -0.87
HDAC6-203ENST00000376619 ATG12O94817 140 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 FTH1P19P0C7X4 201 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 OR3A1P47881 315 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 MECP2P51608 486 aaKnown RBP9.64□□□□□ -0.87
HDAC6-203ENST00000376619 SLC25A42Q86VD7 318 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 CBLN2Q8IUK8 224 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 AIFM2Q9BRQ8 373 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 WNT5BQ9H1J7 359 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 BCL2L11O43521 198 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 METTL15P1P0C7V9 234 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 IRF2P14316 349 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 AESQ08117 197 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 ZNF573Q86YE8 665 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 STPG2Q8N412 459 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 SLC25A40Q8TBP6 338 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 RPS4Y2Q8TD47 263 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 ISOC2Q96AB3 205 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 CMTM3Q96MX0 182 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 SPIN2AQ99865 258 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 SPIN2BQ9BPZ2 258 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 PIPOXQ9P0Z9 390 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-203ENST00000376619 IGLV3-12A0A075B6K2 115 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 RHBDL1O75783 438 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 TPPPO94811 219 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 CRYAAP02489 173 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 NMBP08949 121 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 GNG3P63215 75 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 CISD2Q8N5K1 135 aaKnown RBP9.64□□□□□ -0.87
HDAC6-203ENST00000376619 SCCPDHQ8NBX0 429 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 SLC25A28Q96A46 364 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 LYZL4Q96KX0 146 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 GCM1Q9NP62 436 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 SLC17A5Q9NRA2 495 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 HNF1AP20823 631 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 FPR2P25090 351 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 PTGER4P35408 488 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 ARR3P36575 388 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 PTGDSP41222 190 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-203ENST00000376619 ABHD5Q8WTS1 349 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 RTL8AQ9BWD3 113 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 DYNLRB1Q9NP97 96 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 FAM212BQ9NTI7 297 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-203ENST00000376619 GNG13Q9P2W3 67 aa9.64□□□□□ -0.87
HDAC6-203ENST00000376619 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 RD3LP0DJH9 198 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 CPN1P15169 458 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 RPS10P46783 165 aaKnown RBP9.63□□□□□ -0.87
HDAC6-203ENST00000376619 C1orf100Q5SVJ3 147 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 ASPHD2Q6ICH7 369 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 MITD1Q8WV92 249 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 OPN3Q9H1Y3 402 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-203ENST00000376619 A0A0A6YYD4 124 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 NKX2-6A6NCS4 301 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 TXNL1O43396 289 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 ENSAO43768 121 aaKnown RBP9.63□□□□□ -0.87
HDAC6-203ENST00000376619 GNG10P50151 68 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 PPP1CBP62140 327 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 RPL23AP62750 156 aaKnown RBP9.63□□□□□ -0.87
HDAC6-203ENST00000376619 FAM3AP98173 230 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 RUNX1Q01196 453 aa9.63□□□□□ -0.87
HDAC6-203ENST00000376619 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms