RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 ZNF724A8MTY0 619 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 K7N7A8 449 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 ST8SIA3O43173 380 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 CST7O76096 145 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 MT-CO3P00414 261 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 EPHA1P21709 976 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 LMO1P25800 156 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 DUSP1P28562 367 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 SOHLH1Q5JUK2 328 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 SUMF2Q8NBJ7 301 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 OR1J1Q8NGS3 322 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 TMEM171Q8WVE6 324 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 NPIPA2E9PIF3 369 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 NPIPA3F8WFD2 350 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 IGHV2-70P01814 119 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 LCATP04180 440 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 CXCL1P09341 107 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 ATP6V0CP27449 155 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 ZNF133P52736 654 aaPredicted RBP13.1□□□□□ -0.31
MSH5-203ENST00000375750 NDUFA6P56556 154 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 CXorf66Q5JRM2 361 aaPredicted RBP13.1□□□□□ -0.31
MSH5-203ENST00000375750 PPP1R32Q7Z5V6 425 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 TUBA4BQ9H853 241 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 HSF4Q9ULV5 492 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 LIPGQ9Y5X9 500 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 ZNF407Q9C0G0 2248 aa13.1□□□□□ -0.31
MSH5-203ENST00000375750 TNFSF11O14788 317 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 TNFSF12O43508 249 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 SSSCA1O60232 199 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 KIAA0141Q14154 515 aaPredicted RBP13.09□□□□□ -0.31
MSH5-203ENST00000375750 PPA1Q15181 289 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 P4HA3Q7Z4N8 544 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 ZIC4Q8N9L1 334 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 TCTEX1D2Q8WW35 142 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 GALNT14Q96FL9 552 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 GGACTQ9BVM4 153 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 ULBP2Q9BZM5 246 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 PARPBPQ9NWS1 579 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 ST3GAL6Q9Y274 331 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 IGLV3-32A0A0A0MS00 114 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 CCL3P10147 92 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 PLA2G5P39877 138 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 H3F3AP84243 136 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 Q0VFX4 171 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 SPSB3Q6PJ21 355 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 RPS19BP1Q86WX3 136 aaKnown RBP13.09□□□□□ -0.31
MSH5-203ENST00000375750 TMEM123Q8N131 208 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 FGFBP3Q8TAT2 258 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 TMEM54Q969K7 222 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 BOD1Q96IK1 185 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 YPEL4Q96NS1 127 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 SPRY4Q9C004 299 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 OTX1P32242 354 aaPredicted RBP13.09□□□□□ -0.31
MSH5-203ENST00000375750 NPBWR2P48146 333 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 RND3P61587 244 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 HEPN1Q6WQI6 88 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 RAB39BQ96DA2 213 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 ZPBPQ9BS86 351 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 SRXN1Q9BYN0 137 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 GLRX2Q9NS18 164 aa13.09□□□□□ -0.31
MSH5-203ENST00000375750 AHCTF1Q8WYP5 2266 aa13.08□□□□□ -0.31
MSH5-203ENST00000375750 KMT2EQ8IZD2 1858 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 H3BQ15 152 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 HSPB6O14558 160 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 LY86O95711 162 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 B4GALT1P15291 398 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 ECI1P42126 302 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 HES3Q5TGS1 186 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 GPR157Q5UAW9 335 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 LGI3Q8N145 548 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 FADS6Q8N9I5 356 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 OR4D5Q8NGN0 318 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 BORCS8Q96FH0 119 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 DDA1Q9BW61 102 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 EP300Q09472 2414 aaPredicted RBP13.08□□□□□ -0.32
MSH5-203ENST00000375750 TGIF2-C20orf24A0A0A6YYL0 155 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 RBFOX3A6NFN3 312 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 TP53I11O14683 189 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 CA11O75493 328 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 TMEM50AO95807 157 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 SSR4P51571 173 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 RHEBQ15382 184 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 SPNS3Q6ZMD2 512 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 ODF3L1Q8IXM7 274 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 OR2C3Q8N628 320 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 COMMD1Q8N668 190 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 SPTSSAQ969W0 71 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 PBDC1Q9BVG4 233 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 SLC7A11Q9UPY5 501 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 PCNX2A6NKB5 2137 aa13.08□□□□□ -0.32
MSH5-203ENST00000375750 A0A0J9YW62 118 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 TAGLN2P37802 199 aaKnown RBP13.07□□□□□ -0.32
MSH5-203ENST00000375750 SSPNQ14714 243 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 PYY3Q5JQD4 70 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 SPIN3Q5JUX0 258 aa13.07□□□□□ -0.32
MSH5-203ENST00000375750 C10orf128Q5T292 105 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms