RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NRIP2Q9BQI9 281 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CHMP1AQ9HD42 196 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 RAB18Q9NP72 206 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 U3KQ87 197 aa15.31■□□□□ 0.04
HLA-DQB1-201ENST00000374943 FAM208BQ5VWN6 2430 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 POM121CA8CG34 1229 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 L7N2F9 121 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 M0R233 179 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CCSO14618 274 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 MLNRO43193 412 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TSC22D2O75157 780 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SSTR2P30874 369 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 GLP1RP43220 463 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 UCNP55089 124 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 UCP3P55916 312 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SORDQ00796 357 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 RBM39Q14498 530 aaKnown RBP15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 Q6P435 159 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 C3P1Q6ZMU1 363 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 FAM210AQ96ND0 272 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 PDCD10Q9BUL8 212 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 WDR13Q9H1Z4 485 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 PIGMQ9H3S5 423 aa15.3■□□□□ 0.04
HLA-DQB1-201ENST00000374943 BSNQ9UPA5 3926 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 FXYD6-FXYD2A0A087WZ82 144 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TRAV24A0A0B4J272 114 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 NOS1APO75052 506 aaPredicted RBP15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SLC25A4P12235 298 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 RPA2P15927 270 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 OPCMLQ14982 345 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TMEM65Q6PI78 240 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 KCTD9Q7L273 389 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 DOLPP1Q86YN1 238 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SLC7A5P1Q8MH63 180 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CISD2Q8N5K1 135 aaKnown RBP15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SPERTQ8NA61 448 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 MOB3AQ96BX8 217 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TLNRD1Q9H1K6 362 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ZNF835Q9Y2P0 537 aa15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CHD3Q12873 2000 aaKnown RBP15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 DSPP15924 2871 aaKnown RBP15.29■□□□□ 0.04
HLA-DQB1-201ENST00000374943 KIR2DS1A0A191URI9 304 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CRYM-AS1A6NIL9 109 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 H0YL77 283 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ARPC5O15511 151 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TIMM8AO60220 97 aaPredicted RBP15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 MPC2O95563 127 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ZNF728P0DKX0 622 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 DUSP1P28562 367 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 GCH1P30793 250 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 FCGR2CP31995 323 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 KIR2DS4P43632 304 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 KIR2DS1Q14954 304 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ZNF146Q15072 292 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SLC9A3R2Q15599 337 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 IGFBP7Q16270 282 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ANKRD55Q3KP44 614 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 SHEQ5VZ18 495 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ZNF880Q6PDB4 577 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 OR8H1Q8NGG4 311 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 LILRB4Q8NHJ6 448 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 PIK3IP1Q96FE7 263 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 DPCDQ9BVM2 203 aaPredicted RBP15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 NMES1Q9C002 83 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CXXC4Q9H2H0 198 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TREM2Q9NZC2 230 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 COMMD9Q9P000 198 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 DMXL2Q8TDJ6 3036 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 A8MXE2 369 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 MDH2P40926 338 aaKnown RBP15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 GSG1LQ6UXU4 331 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 POC1AQ8NBT0 407 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 ZNF680Q8NEM1 530 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 MRPL30Q8TCC3 161 aaKnown RBP15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 HES4Q9HCC6 221 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 TINAGQ9UJW2 476 aa15.28■□□□□ 0.04
HLA-DQB1-201ENST00000374943 CDIPTO14735 213 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 KNG1P01042 644 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 IFNA2P01563 188 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 S100A11P31949 105 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SERPINF1P36955 418 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CYCSP99999 105 aaKnown RBP15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SPIN3Q5JUX0 258 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 Q6ZR03 302 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 MRGPRGQ86SM5 289 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SGPP2Q8IWX5 399 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 SLC38A6Q8IZM9 456 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 KDF1Q8NAX2 398 aaPredicted RBP15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 NEK7Q8TDX7 302 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 MUCL1Q96DR8 90 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ATP23Q9Y6H3 246 aa15.27■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TRDCB7Z8K6 153 aa15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 DEGS1O15121 323 aa15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 CTXN2P0C2S0 81 aa15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 ZNF83P51522 516 aa15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 RGS7BPQ6MZT1 257 aaPredicted RBP15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 C11orf87Q6NUJ2 197 aa15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 GFRALQ6UXV0 394 aa15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 TMUB2Q71RG4 321 aa15.26■□□□□ 0.03
HLA-DQB1-201ENST00000374943 PPP1R1CQ8WVI7 109 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms