RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 MRGPRX4Q96LA9 322 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 OXGR1Q96P68 337 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 PLEK2Q9NYT0 353 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 IGKV1-27A0A075B6S5 117 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 OR5H1A6NKK0 313 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 SSSCA1O60232 199 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 ZNF133P52736 654 aaPredicted RBP11.88□□□□□ -0.51
USP49-201ENST00000373006 RTL6Q6ICC9 239 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 OR10AD1Q8NGE0 317 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 OR14L1PQ8NHC6 308 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 METTL9Q9H1A3 318 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 V9GYS6 101 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 M0R135 149 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 CXorf66Q5JRM2 361 aaPredicted RBP11.88□□□□□ -0.51
USP49-201ENST00000373006 PRAMEF20Q5VT98 475 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 GJC3Q8NFK1 279 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 OR5C1Q8NGR4 320 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 DTD1Q8TEA8 209 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 ZNF799Q96GE5 643 aa11.88□□□□□ -0.51
USP49-201ENST00000373006 OR2J2O76002 312 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 SUMO3P55854 103 aaPredicted RBP11.87□□□□□ -0.51
USP49-201ENST00000373006 TCEAL6Q6IPX3 200 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 ZNF837Q96EG3 531 aaPredicted RBP11.87□□□□□ -0.51
USP49-201ENST00000373006 OR14J1Q9UGF5 321 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 WSB1Q9Y6I7 421 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 CHD3Q12873 2000 aaKnown RBP11.87□□□□□ -0.51
USP49-201ENST00000373006 IGLV3-1P01715 115 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 EPHA1P21709 976 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 MSR1P21757 451 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 AADACP22760 399 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 ENDOGQ14249 297 aaKnown RBP11.87□□□□□ -0.51
USP49-201ENST00000373006 HIST3H3Q16695 136 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 D2HGDHQ8N465 521 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 OR4D5Q8NGN0 318 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 ZNF385AQ96PM9 386 aaKnown RBP11.87□□□□□ -0.51
USP49-201ENST00000373006 SYT3Q9BQG1 590 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 UCK1Q9HA47 277 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 PRSS47A8MTI9 375 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 IFNL4K9M1U5 179 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 CA11O75493 328 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 CD38P28907 300 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 ICAM4Q14773 271 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 TIPARPQ7Z3E1 657 aaKnown RBP11.87□□□□□ -0.51
USP49-201ENST00000373006 NIPSNAP3BQ9BS92 247 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 BCO1Q9HAY6 547 aa11.87□□□□□ -0.51
USP49-201ENST00000373006 A0A0U1RQV5 110 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.86□□□□□ -0.51
USP49-201ENST00000373006 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.86□□□□□ -0.51
USP49-201ENST00000373006 SHISA7A6NL88 538 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 PROB1E7EW31 1015 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 PGA5P0DJD9 388 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 IL2RGP31785 369 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 NKX2-1P43699 371 aaPredicted RBP11.86□□□□□ -0.51
USP49-201ENST00000373006 ZNF266Q14584 549 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 KCNMB1Q16558 191 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 ANKRD37Q7Z713 158 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 LRTM2Q8N967 370 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 NECAP1Q8NC96 275 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 PLPP5Q8NEB5 264 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 TSTD1Q8NFU3 115 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 GLRX2Q9NS18 164 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 ATG2AQ2TAZ0 1938 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 IGHV1OR21-1A0A087WYE8 117 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 C10orf142B7Z368 130 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 TLX3O43711 291 aaPredicted RBP11.86□□□□□ -0.51
USP49-201ENST00000373006 TRGC1P0CF51 173 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 PTGDSP41222 190 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 RPL29P47914 159 aaKnown RBP11.86□□□□□ -0.51
USP49-201ENST00000373006 ETFRF1Q6IPR1 90 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 NFAM1Q8NET5 270 aaPredicted RBP11.86□□□□□ -0.51
USP49-201ENST00000373006 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 FRZBQ92765 325 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 MRPL37Q9BZE1 423 aaKnown RBP11.86□□□□□ -0.51
USP49-201ENST00000373006 WDFY4Q6ZS81 3184 aa11.86□□□□□ -0.51
USP49-201ENST00000373006 C3orf85A0A1B0GTC6 90 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 A0A1B0GW64 132 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 SEC14L6B5MCN3 397 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 GNG10P50151 68 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 DYNLT3P51808 116 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 RPL23AP62750 156 aaKnown RBP11.85□□□□□ -0.51
USP49-201ENST00000373006 Q6ZPA2 131 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 TMEM123Q8N131 208 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 HIST3H2BBQ8N257 126 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 TMEM252Q8N6L7 170 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 UBE2J1Q9Y385 318 aaPredicted RBP11.85□□□□□ -0.51
USP49-201ENST00000373006 TMED3Q9Y3Q3 217 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 IGKV1-12A0A0C4DH73 117 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 IGKV1D-12P01611 117 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 CTSSP25774 331 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 HERV-K104P61576 105 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 HNF4GQ14541 408 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 P4HTMQ9NXG6 502 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 KIAA1456Q9P272 454 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 ST3GAL6Q9Y274 331 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 FRYQ5TBA9 3013 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 CACNA1DQ01668 2161 aa11.85□□□□□ -0.51
USP49-201ENST00000373006 C2CD4DB7Z1M9 353 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms