RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PSMB5P28074 263 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 PTGER4P35408 488 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 CSNK2A1P68400 391 aaPredicted RBP9.33□□□□□ -0.92
TRERF1-203ENST00000372917 CEACAM21Q3KPI0 293 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 COMMD2Q86X83 199 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 CSNK2A3Q8NEV1 391 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 RBMXL1Q96E39 390 aaKnown RBP9.33□□□□□ -0.92
TRERF1-203ENST00000372917 HDAC8Q9BY41 377 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 RNF208Q9H0X6 261 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 COL4A4P53420 1690 aaPredicted RBP9.33□□□□□ -0.92
TRERF1-203ENST00000372917 IGLC7A0M8Q6 106 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 C1QTNF3-AMACRE9PGA6 284 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 ZNF43P17038 809 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 ZNF93P35789 620 aaPredicted RBP9.33□□□□□ -0.92
TRERF1-203ENST00000372917 MPLP40238 635 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 BCL6P41182 706 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 MRPS34P82930 218 aaKnown RBP9.33□□□□□ -0.92
TRERF1-203ENST00000372917 HIST3H3Q16695 136 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 GPR157Q5UAW9 335 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 FAM78BQ5VT40 261 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 C9orf40Q8IXQ3 194 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 GUCD1Q96NT3 240 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 DEFB118Q96PH6 123 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 TNFRSF13CQ96RJ3 184 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 CHRDL1Q9BU40 450 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 ZDHHC11Q9H8X9 412 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 CDC42EP3Q9UKI2 254 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 VDAC3Q9Y277 283 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 MRPS16Q9Y3D3 137 aaKnown RBP9.33□□□□□ -0.92
TRERF1-203ENST00000372917 KCNE3Q9Y6H6 103 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 DOCK9Q9BZ29 2069 aa9.33□□□□□ -0.92
TRERF1-203ENST00000372917 GREB1Q4ZG55 1949 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 ST8SIA3O43173 380 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 TNFSF15O95150 251 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 NUDT14O95848 222 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 HMGN2P05204 90 aaKnown RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 H2BFMP0C1H6 154 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 CCR2P41597 374 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 PLP1P60201 277 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 ZFP36L1Q07352 338 aaKnown RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 CDKN3Q16667 212 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 RAET1LQ5VY80 246 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 KCNIP4Q6PIL6 250 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 WDR74Q6RFH5 385 aaPredicted RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 LCN15Q6UWW0 184 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 HOGA1Q86XE5 327 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 RTBDNQ9BSG5 229 aaPredicted RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 RSG1Q9BU20 258 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 PRSS16Q9NQE7 514 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 FBXL7Q9UJT9 491 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 OR51B4Q9Y5P0 310 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 PTPRDP23468 1912 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 KIF26AQ9ULI4 1882 aaPredicted RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 SPAARA0A1B0GVQ0 90 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 SERINC4A6NH21 518 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 HBE1P02100 147 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 HIST1H1CP16403 213 aaKnown RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 MRPL58Q14197 206 aaKnown RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 MPV17L2Q567V2 206 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 PHYHD1Q5SRE7 291 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 WDR82Q6UXN9 313 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 ARHGDIGQ99819 225 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 ZFYVE21Q9BQ24 234 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 CLDND1Q9NY35 253 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 DEC1Q9P2X7 70 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 MMP17Q9ULZ9 603 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 LOC102723971A0A1B0GUV8 181 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 CDIPTO14735 213 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 TAX1BP3O14907 124 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 PRNPP04156 253 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 CYBAP13498 195 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 SUPT4H1P63272 117 aaKnown RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 LRRC10Q5BKY1 277 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 ZNF788Q6ZQV5 615 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 PTX4Q96A99 478 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 PYGO2Q9BRQ0 406 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 C1orf123Q9NWV4 160 aa9.32□□□□□ -0.92
TRERF1-203ENST00000372917 C19orf53Q9UNZ5 99 aaPredicted RBP9.32□□□□□ -0.92
TRERF1-203ENST00000372917 SDCBPO00560 298 aaPredicted RBP9.31□□□□□ -0.92
TRERF1-203ENST00000372917 CD1AP06126 327 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 SCGB1A1P11684 91 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 PMCHP20382 165 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 HNRNPA1L2Q32P51 320 aaKnown RBP9.31□□□□□ -0.92
TRERF1-203ENST00000372917 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 ZNF665Q9H7R5 613 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 CALHM2Q9HA72 323 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 GPR132Q9UNW8 380 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 HELZP42694 1942 aaKnown RBP9.31□□□□□ -0.92
TRERF1-203ENST00000372917 KIAA1671Q9BY89 1806 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 NSG1A0A0A6YYJ2 146 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 PRR32B1ATL7 298 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 NPIPB7O75200 414 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 ALOX5APP20292 161 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 CTRLP40313 264 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 FBXW4P57775 412 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 CSNK1G2P78368 415 aa9.31□□□□□ -0.92
TRERF1-203ENST00000372917 RAB30Q15771 203 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms