RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ESPL1Q14674 2120 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 BRWD1Q9NSI6 2320 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV1-27A0A075B6S5 117 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TRAV39A0A0B4J263 110 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 PROB1E7EW31 1015 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 G3V3Y1 287 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TAAR5O14804 337 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TMEM127O75204 238 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 OR2J2O76002 312 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 GOSR1O95249 250 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 IFNA21P01568 189 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 GUSBP08236 651 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 EGR1P18146 543 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 NKX2-1P43699 371 aaPredicted RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 DYNLT3P51808 116 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 AFF3P51826 1226 aaKnown RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 POLR2HP52434 150 aaKnown RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 RPL23AP62750 156 aaKnown RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 COL10A1Q03692 680 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 FZD2Q14332 565 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TMEM187Q14656 261 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 HLA-BQ31612 363 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 SNAI3Q3KNW1 292 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TDRG1Q3Y452 100 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 ABCA11PQ4W5N1 156 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 HIST2H3PS2Q5TEC6 136 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 BTNL3Q6UXE8 466 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 YAF2Q8IY57 180 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF248Q8NDW4 579 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 GATAD1Q8WUU5 269 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TMEM37Q8WXS4 190 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 EMG1Q92979 244 aaKnown RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 PTX4Q96A99 478 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 FAM122AQ96E09 287 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 GINS3Q9BRX5 216 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 SNHG12Q9BXW3 62 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 SLC2A9Q9NRM0 540 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 IL17BQ9UHF5 180 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF107Q9UII5 783 aaPredicted RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TUBD1Q9UJT1 453 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 PTPRSQ13332 1948 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 CPAMD8Q8IZJ3 1885 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 CABIN1Q9Y6J0 2220 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 A0A0U1RQV5 110 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 BCAT2O15382 392 aaPredicted RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 RRP8O43159 456 aaKnown RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 GSTP1P09211 210 aaKnown RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 NPSP0C0P6 89 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 SEC11BP0C7V7 166 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF728P0DKX0 622 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 CTSEP14091 401 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 FOLR1P15328 257 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF43P17038 809 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 DUSP1P28562 367 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 PMELP40967 661 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 PKIAP61925 76 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 MYBPHQ13203 477 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 BATFQ16520 125 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 DEFB133Q30KQ1 61 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 HIKESHIQ53FT3 197 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 HLA-DQA1Q5Y7H0 255 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 NCR3LG1Q68D85 454 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 TEX38Q6PEX7 206 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 DEGS2Q6QHC5 323 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 OR1K1Q8NGR3 316 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 CAPNS2Q96L46 248 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 S100A13Q99584 98 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 OPA3Q9H6K4 179 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 SERINC1Q9NRX5 453 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 IL36RNQ9UBH0 155 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 PIGLQ9Y2B2 252 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 MEMO1Q9Y316 297 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 BORCS7-ASMTA0A0B4J1R7 106 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 A0A0G2JRQ6 117 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 IGHV3-64DA0A0J9YX35 117 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 SMCO3A2RU48 225 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 A6NIZ1 184 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 CEACAM18A8MTB9 384 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 A8MWP6 167 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 C9J4A7 227 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 E5RGE8 158 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 TSTD3H0UI37 97 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 FAM229AH3BQW9 127 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 ADAM20O43506 726 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 NUPR1O60356 82 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 GPR137BO60478 399 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 TSPAN2O60636 221 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 PIAS2O75928 621 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 GAPDHP04406 335 aaKnown RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV3-11P04433 115 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 CHRM2P08172 466 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF25P17030 456 aaPredicted RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 HNRNPA2B1P22626 353 aaKnown RBP4.69□□□□□ -1.66
ATG4A-204ENST00000372246 AADACP22760 399 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 CD200P41217 278 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 GNG10P50151 68 aa4.69□□□□□ -1.66
ATG4A-204ENST00000372246 UCP2P55851 309 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms