RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 VAX2Q9UIW0 290 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 ELF5Q9UKW6 265 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR2W1Q9Y3N9 320 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 KLF3P57682 345 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZNF273Q14593 569 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 PWWP2BQ6NUJ5 590 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 OLIG3Q7RTU3 272 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR10G9Q8NGN4 311 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR10G7Q8NGN6 311 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 ACY3Q96HD9 319 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 NCOR1P1Q9H4R4 102 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZAR1LA6NP61 321 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 H3BP45 60 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 M0QZ24 198 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 FPR2P25090 351 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 ELFN2Q5R3F8 820 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 SLC35A4Q96G79 324 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 LOXL4Q96JB6 756 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM167BQ9NRX6 74 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 P01737 135 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 KIR2DL1P43626 348 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 KIR2DL2P43627 348 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 B4GALNT1Q00973 533 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 ROM1Q03395 351 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 PNLIPRP3Q17RR3 467 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 ARRDC1Q8N5I2 433 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR11G2Q8NGC1 345 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR5C1Q8NGR4 320 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 RAB33BQ9H082 229 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 TRGV5A0A0B4J1U4 118 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 PCBP3P57721 371 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 TWIST1Q15672 202 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM95Q3KNT9 176 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 CT55Q8WUE5 264 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 PQLC2LA1A4F0 135 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM262E9PQX1 116 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 CXCL13O43927 109 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZBTB25P24278 435 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZNF841Q6ZN19 808 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 NUBPLQ8TB37 319 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 WIPI2Q9Y4P8 454 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 A0A1W2PNR3 127 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 PMS2CLQ68D20 193 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM99Q8N816 258 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM147Q9BVK8 224 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 MPC2O95563 127 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 ANKRD34CP0C6C1 535 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 HIST1H1DP16402 221 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 THBS4P35443 961 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 TPBGQ13641 420 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 TBC1D26Q86UD7 250 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 CSF3RQ99062 836 aa12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 MYO18AQ92614 2054 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-202ENST00000372190 PAQR6Q6TCH4 344 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 OVCH2Q7RTZ1 564 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 OR52N4Q8NGI2 321 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 RPEQ96AT9 228 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 SDF2Q99470 211 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 SLC25A37Q9NYZ2 338 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 HLA-GP17693 338 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 SURF2Q15527 256 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 LHFPL2Q6ZUX7 228 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 NKAIN4Q8IVV8 208 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 GJC3Q8NFK1 279 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZNF418Q8TF45 676 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 APOBEC4Q8WW27 367 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 GMPPAQ96IJ6 420 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 ONECUT2O95948 504 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 HBZP02008 142 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 CRYAAP02489 173 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 HES7Q9BYE0 225 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 SLC25A22Q9H936 323 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 MYO10Q9HD67 2058 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 FAM221AA4D161 298 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 PRKNO60260 465 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 DUSP2Q05923 314 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 BHLHA9Q7RTU4 235 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 ST8SIA1Q92185 356 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 MOB3AQ96BX8 217 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 OPALINQ96PE5 141 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 A0A1B0GW15 77 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 HMGN4O00479 90 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 SH2D1BO14796 132 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 MT-ND6P03923 174 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 SP1P08047 785 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 RIPPLY3P57055 190 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMEM211Q6ICI0 200 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 SPNS3Q6ZMD2 512 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 RTL8AQ9BWD3 113 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 LHX9Q9NQ69 397 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 JKAMPQ9P055 326 aa12.49□□□□□ -0.41
RAPGEF1-202ENST00000372190 LOC107986453A0A1B0GWG9 222 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms