RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 NKX2-6A6NCS4 301 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 OR5B21A6NL26 309 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 AQP7O14520 342 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 CCSO14618 274 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 CRHP06850 196 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 DUX4L2P0CJ85 424 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 DUX4L3P0CJ86 424 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 DUX4L4P0CJ87 422 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 DUX4L5P0CJ88 424 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 DUX4L6P0CJ89 424 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 DUX4L7P0CJ90 424 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 PGAM2P15259 253 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 CHRNB4P30926 498 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 FOXG1P55316 489 aaPredicted RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 TGFBR3Q03167 851 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 MPV17LQ2QL34 196 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 Q6ZS49 121 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 KCTD9Q7L273 389 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 HIST1H2AAQ96QV6 131 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 CITED4Q96RK1 184 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 VRK1Q99986 396 aaPredicted RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 SULT4A1Q9BR01 284 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 FAAP24Q9BTP7 215 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 PLK3Q9H4B4 646 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 RHOFQ9HBH0 211 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 CHMP1AQ9HD42 196 aaPredicted RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 KCNJ16Q9NPI9 418 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 C12orf4Q9NQ89 552 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 DUX4Q9UBX2 424 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 ZNF230Q9UIE0 474 aaPredicted RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 GPR160Q9UJ42 338 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 MED12LQ86YW9 2145 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 TACC2O95359 2948 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 HIVEP1P15822 2718 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 TRBV6-7A0A0A0MS04 114 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 C5orf51A6NDU8 294 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 SDCBPO00560 298 aaPredicted RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 GEMIN2O14893 280 aaKnown RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 BCL2L11O43521 198 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 IL18BPO95998 194 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 PET100P0DJ07 73 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 RRASP10301 218 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 CCNOP22674 350 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 PSMB6P28072 239 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 SERPINF1P36955 418 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 FGF12P61328 243 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 DHRS11Q6UWP2 260 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 SLC25A26Q70HW3 274 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 RPRMLQ8N4K4 120 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 PHYHIPLQ96FC7 376 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 ZNF2Q9BSG1 426 aaPredicted RBP12.05□□□□□ -0.48
LDB3-204ENST00000372066 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 C1orf123Q9NWV4 160 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 ZNF503-AS2A6NEH8 195 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 ANKRD30BLA7E2S9 258 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 CD300LBA8K4G0 201 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 FAM25EA8MYX2 175 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 SFTPBP07988 381 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 OR5H8P0DN80 308 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 RPS2P15880 293 aaKnown RBP12.04□□□□□ -0.48
LDB3-204ENST00000372066 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
LDB3-204ENST00000372066 TBC1D28Q2M2D7 210 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 PIGYQ3MUY2 71 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 CALHM1Q8IU99 346 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 SGPP2Q8IWX5 399 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 INO80EQ8NBZ0 244 aaPredicted RBP12.04□□□□□ -0.48
LDB3-204ENST00000372066 HPSE2Q8WWQ2 592 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 PIK3IP1Q96FE7 263 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 C12orf49Q9H741 205 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 STARD10Q9Y365 291 aa12.04□□□□□ -0.48
LDB3-204ENST00000372066 GTF3C1Q12789 2109 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 TRAPPC2LH3BP13 241 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 IFNA2P01563 188 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 LYL1P12980 280 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 IGFBP2P18065 325 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 RBMXP38159 391 aaKnown RBP12.03□□□□□ -0.48
LDB3-204ENST00000372066 GLP1RP43220 463 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 UCP3P55916 312 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 SLC9A3R2Q15599 337 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 COMMD7Q86VX2 200 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 ZNF573Q86YE8 665 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 DMRTC2Q8IXT2 367 aaPredicted RBP12.03□□□□□ -0.48
LDB3-204ENST00000372066 SLC30A7Q8NEW0 376 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 OR5M9Q8NGP3 310 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 MAFIPQ8WZ33 124 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 SARAFQ96BY9 339 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 BOD1Q96IK1 185 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 SEC22AQ96IW7 307 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 C2orf50Q96LR7 162 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 HDHD3Q9BSH5 251 aaPredicted RBP12.03□□□□□ -0.48
LDB3-204ENST00000372066 PKIBQ9C010 78 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 SPACA1Q9HBV2 294 aa12.03□□□□□ -0.48
LDB3-204ENST00000372066 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.48
LDB3-204ENST00000372066 IGKV1D-8A0A087WSZ0 117 aa12.02□□□□□ -0.49
LDB3-204ENST00000372066 CRYM-AS1A6NIL9 109 aa12.02□□□□□ -0.49
LDB3-204ENST00000372066 EEF1E1-BLOC1S5C9J1V9 151 aa12.02□□□□□ -0.49
LDB3-204ENST00000372066 GLAP06280 429 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms