RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ANKRD30BLA7E2S9 258 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 FOXI3A8MTJ6 420 aaPredicted RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 FTH1P19P0C7X4 201 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 CEBPDP49716 269 aaPredicted RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 CYCSP99999 105 aaKnown RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 SMCO1Q147U7 214 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 PAN3Q58A45 887 aaKnown RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 TMEM88Q6PEY1 159 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 BAP18Q8IXM2 172 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 BVESQ8NE79 360 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 SLC30A7Q8NEW0 376 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 WBP1Q96G27 269 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 MYOZ1Q9NP98 299 aaPredicted RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 PARD6AQ9NPB6 346 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 RASL12Q9NYN1 266 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 UBE2J1Q9Y385 318 aaPredicted RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 K7EPK0 472 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 IL18BPO95998 194 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 S100A6P06703 90 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 RPS2P15880 293 aaKnown RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 WNT5AP41221 380 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 RPL35P42766 123 aaKnown RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 FAHD2BQ6P2I3 314 aaPredicted RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 FAM71E2Q8N5Q1 922 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 OR52M1Q8NGK5 317 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 APOBEC3DQ96AK3 386 aaPredicted RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 PIK3IP1Q96FE7 263 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 FAHD2AQ96GK7 314 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 C1QTNF5Q9BXJ0 243 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 RAB18Q9NP72 206 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 INTS1Q8N201 2190 aaKnown RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 NME2P1O60361 137 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 ZNF806P0C7X5 589 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 TPT1P13693 172 aaKnown RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 UBE2NP61088 152 aaKnown RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 PLEKHN1Q494U1 663 aaPredicted RBP10.09□□□□□ -0.79
PDE6C-201ENST00000371447 TMEM268Q5VZI3 342 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 ZNF565Q8N9K5 539 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 RFNGQ9Y644 331 aa10.09□□□□□ -0.79
PDE6C-201ENST00000371447 A6NLC8 198 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 SLC25A4P12235 298 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 GNRHRP30968 328 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 FABP6P51161 128 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 CAV2P51636 162 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 CLINT1Q14677 625 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 OR8B8Q15620 311 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 HSD17B11Q8NBQ5 300 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 REPIN1Q9BWE0 567 aaKnown RBP10.08□□□□□ -0.8
PDE6C-201ENST00000371447 KIAA1549Q9HCM3 1950 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 CDIPTO14735 213 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 HSPA12AO43301 675 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 C1QL1O75973 258 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 RPL12P30050 165 aaKnown RBP10.08□□□□□ -0.8
PDE6C-201ENST00000371447 ALDH3B1P43353 468 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 RNASE11Q8TAA1 199 aaKnown RBP10.08□□□□□ -0.8
PDE6C-201ENST00000371447 MRPS24Q96EL2 167 aaKnown RBP10.08□□□□□ -0.8
PDE6C-201ENST00000371447 TP53RKQ96S44 253 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 LHX6Q9UPM6 363 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 PLCE1Q9P212 2302 aa10.08□□□□□ -0.8
PDE6C-201ENST00000371447 MED6O75586 246 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 CNOT4O95628 575 aaKnown RBP10.07□□□□□ -0.8
PDE6C-201ENST00000371447 ARL6IP1Q15041 203 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 PPA1Q15181 289 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF826PQ6ZT77 177 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 TMEM217Q8N7C4 229 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 POM121L2Q96KW2 1035 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 NMES1Q9C002 83 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 MEMO1Q9Y316 297 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 H3BP45 60 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 PPYP01298 95 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 EIF3IQ13347 325 aaKnown RBP10.07□□□□□ -0.8
PDE6C-201ENST00000371447 LTC4SQ16873 150 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 PRSS54Q6PEW0 395 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 FBXW12Q6X9E4 464 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 C20orf204Q6ZNR8 217 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 POC1AQ8NBT0 407 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 C10orf35Q96D05 121 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 LRRC46Q96FV0 321 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 WDYHV1Q96HA8 205 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 NUDT16L1Q9BRJ7 211 aaKnown RBP10.07□□□□□ -0.8
PDE6C-201ENST00000371447 SLC5A7Q9GZV3 580 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 SAV1Q9H4B6 383 aaPredicted RBP10.07□□□□□ -0.8
PDE6C-201ENST00000371447 RGCCQ9H4X1 137 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 GPR31O00270 319 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 TK1P04183 234 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 FHITP49789 147 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF616Q08AN1 781 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 FBXW9Q5XUX1 488 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 TMEM42Q69YG0 159 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 FAM53AQ6NSI3 398 aaPredicted RBP10.07□□□□□ -0.8
PDE6C-201ENST00000371447 VHLLQ6RSH7 139 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 GAPTQ8N292 157 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 LHFPL5Q8TAF8 219 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 ERGIC1Q969X5 290 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 MARC2Q969Z3 335 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 TAF9BQ9HBM6 251 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 CDH20Q9HBT6 801 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 OBP2BQ9NPH6 170 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 CCL28Q9NRJ3 127 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms