RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 BANF2Q9H503 90 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 ZNF442Q9H7R0 627 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 FOXD3Q9UJU5 478 aaPredicted RBP6.03□□□□□ -1.44
USP1-202ENST00000371146 OR52A1Q9UKL2 312 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 KLHDC2Q9Y2U9 406 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 LRP12Q9Y561 859 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 CELSR1Q9NYQ6 3014 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 MPIG6BO95866 241 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 GYPAP02724 150 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 CAV3P56539 151 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 AP3S2P59780 193 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 IL18R1Q13478 541 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 OR5AK2Q8NH90 309 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 TMEM163Q8TC26 289 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 C2CD4CQ8TF44 421 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 LRRC29Q8WV35 223 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 TNFAIP8L1Q8WVP5 186 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 TMEM106AQ96A25 262 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 MRPS24Q96EL2 167 aaKnown RBP6.03□□□□□ -1.44
USP1-202ENST00000371146 CCL13Q99616 98 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 WDR13Q9H1Z4 485 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 TMEFF2Q9UIK5 374 aaPredicted RBP6.03□□□□□ -1.44
USP1-202ENST00000371146 FAM96BQ9Y3D0 163 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 LRRC30A6NM36 301 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 C1orf196B1AJZ1 125 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 B9A039 149 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 THBDP07204 575 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 RD3LP0DJH9 198 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 PMELP40967 661 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 SLAQ13239 276 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 ARFRP1Q13795 201 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 RSU1Q15404 277 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 USF2Q15853 346 aaPredicted RBP6.03□□□□□ -1.44
USP1-202ENST00000371146 KLHL22Q53GT1 634 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 ZNF627Q7L945 461 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 CEACAM19Q7Z692 300 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 THNSL2Q86YJ6 484 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 APOBEC3DQ96AK3 386 aaPredicted RBP6.03□□□□□ -1.44
USP1-202ENST00000371146 LGALS12Q96DT0 336 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 RAB3CQ96E17 227 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 NOL4LQ96MY1 436 aaPredicted RBP6.03□□□□□ -1.44
USP1-202ENST00000371146 DPCDQ9BVM2 203 aaPredicted RBP6.03□□□□□ -1.44
USP1-202ENST00000371146 EVA1AQ9H8M9 152 aa6.03□□□□□ -1.44
USP1-202ENST00000371146 PCSK5Q92824 1860 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 A0A1W2PPR1 153 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 OR6C6A6NF89 314 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 TMEM229AB2RXF0 380 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 CCSO14618 274 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 LMX1BO60663 402 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 NPIPB7O75200 414 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 MT-ND2P03891 347 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 NBEAP1P0C6P0 100 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 OR2T7P0C7T2 308 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 COL8A2P25067 703 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 MAP2K3P46734 347 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 RAB5CP51148 216 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 MRPS34P82930 218 aaKnown RBP6.02□□□□□ -1.45
USP1-202ENST00000371146 HES1Q14469 280 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 PCGF3Q3KNV8 242 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 C2orf76Q3KRA6 126 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 ZNF684Q5T5D7 378 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 SYT6Q5T7P8 510 aaPredicted RBP6.02□□□□□ -1.45
USP1-202ENST00000371146 SSX6Q7RTT6 188 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 OR13G1Q8NGZ3 307 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 IGFBPL1Q8WX77 278 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 TAF15Q92804 592 aaKnown RBP eCLIP6.02□□□□□ -1.45
USP1-202ENST00000371146 HOXB13Q92826 284 aaPredicted RBP6.02□□□□□ -1.45
USP1-202ENST00000371146 RAB1CQ92928 201 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 RHBDD3Q9Y3P4 386 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 SORL1Q92673 2214 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 CHD3Q12873 2000 aaKnown RBP6.02□□□□□ -1.45
USP1-202ENST00000371146 WNT9BO14905 357 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 PRODHO43272 600 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 LILRA1O75019 489 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 LIPFP07098 398 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 NMBP08949 121 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 FABP9Q0Z7S8 132 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 PSG7Q13046 419 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 GPR176Q14439 515 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 SEMA6DQ8NFY4 1073 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 UBASH3BQ8TF42 649 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 PSMG3-AS1Q96PY0 264 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 PBOV1Q9GZY1 135 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 MFFQ9GZY8 342 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 SLC25A15Q9Y619 301 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 LHFPL6Q9Y693 200 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 NCKAP5O14513 1909 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 IGLV3-32A0A0A0MS00 114 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 MEIS3P1A6NDR6 274 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 SYNGR3O43761 229 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 PNPP00491 289 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 CAMLGP49069 296 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 INPP1P49441 399 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 LGALS4P56470 323 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 FXYD6P3P58550 94 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 H3F3AP84243 136 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 ADIPOQQ15848 244 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 DMRTA1Q5VZB9 504 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 CLEC9AQ6UXN8 241 aa6.02□□□□□ -1.45
USP1-202ENST00000371146 WDR31Q8NA23 367 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms