RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 MYEF2Q9P2K5 600 aaKnown RBP3□□□□□ -1.93
MCF2-202ENST00000370573 OR5V1Q9UGF6 321 aa3□□□□□ -1.93
MCF2-202ENST00000370573 DAPK2Q9UIK4 370 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ABCA4P78363 2273 aa3□□□□□ -1.93
MCF2-202ENST00000370573 LRRK2Q5S007 2527 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ZNF816-ZNF321PA0A0X1KG74 233 aa3□□□□□ -1.93
MCF2-202ENST00000370573 LOC105371267A0A1B0GV96 52 aa3□□□□□ -1.93
MCF2-202ENST00000370573 GAGE12BA1L429 117 aa3□□□□□ -1.93
MCF2-202ENST00000370573 FUOMA2VDF0 154 aa3□□□□□ -1.93
MCF2-202ENST00000370573 GAGE12HA6NDE8 117 aa3□□□□□ -1.93
MCF2-202ENST00000370573 OOEPA6NGQ2 149 aa3□□□□□ -1.93
MCF2-202ENST00000370573 TUBAL3A6NHL2 446 aa3□□□□□ -1.93
MCF2-202ENST00000370573 DEFB108AA8MXU0 73 aa3□□□□□ -1.93
MCF2-202ENST00000370573 SHISA9B4DS77 424 aa3□□□□□ -1.93
MCF2-202ENST00000370573 H0YL77 283 aa3□□□□□ -1.93
MCF2-202ENST00000370573 AIPO00170 330 aa3□□□□□ -1.93
MCF2-202ENST00000370573 SLC17A2O00624 439 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ABCD4O14678 606 aa3□□□□□ -1.93
MCF2-202ENST00000370573 NUDT3O95989 172 aa3□□□□□ -1.93
MCF2-202ENST00000370573 NRASP01111 189 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ZNF250P15622 560 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CA6P23280 308 aa3□□□□□ -1.93
MCF2-202ENST00000370573 TNFSF8P32971 234 aa3□□□□□ -1.93
MCF2-202ENST00000370573 SOX6P35712 828 aa3□□□□□ -1.93
MCF2-202ENST00000370573 GLRXP35754 106 aa3□□□□□ -1.93
MCF2-202ENST00000370573 MMP15P51511 669 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PPP3R1P63098 170 aa3□□□□□ -1.93
MCF2-202ENST00000370573 S100A12P80511 92 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PRDX4Q13162 271 aa3□□□□□ -1.93
MCF2-202ENST00000370573 SNTB2Q13425 540 aaKnown RBP3□□□□□ -1.93
MCF2-202ENST00000370573 RGS21Q2M5E4 152 aa3□□□□□ -1.93
MCF2-202ENST00000370573 MAJINQ3KP22 176 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ZNF718Q3SXZ3 478 aa3□□□□□ -1.93
MCF2-202ENST00000370573 TMEM268Q5VZI3 342 aa3□□□□□ -1.93
MCF2-202ENST00000370573 C1QL2Q7Z5L3 287 aa3□□□□□ -1.93
MCF2-202ENST00000370573 JAGN1Q8N5M9 183 aa3□□□□□ -1.93
MCF2-202ENST00000370573 BHLHE23Q8NDY6 225 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CSNK2A3Q8NEV1 391 aa3□□□□□ -1.93
MCF2-202ENST00000370573 TRMT10AQ8TBZ6 339 aaKnown RBP3□□□□□ -1.93
MCF2-202ENST00000370573 HPSE2Q8WWQ2 592 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PP6455Q8WZ26 134 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PIGTQ969N2 578 aa3□□□□□ -1.93
MCF2-202ENST00000370573 RFT1Q96AA3 541 aa3□□□□□ -1.93
MCF2-202ENST00000370573 SPSB1Q96BD6 273 aa3□□□□□ -1.93
MCF2-202ENST00000370573 C10orf35Q96D05 121 aa3□□□□□ -1.93
MCF2-202ENST00000370573 DHRS9Q9BPW9 319 aa3□□□□□ -1.93
MCF2-202ENST00000370573 BCL2L14Q9BZR8 327 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PLEKHA1Q9HB21 404 aa3□□□□□ -1.93
MCF2-202ENST00000370573 ABCB9Q9NP78 766 aa3□□□□□ -1.93
MCF2-202ENST00000370573 COMMD3Q9UBI1 195 aa3□□□□□ -1.93
MCF2-202ENST00000370573 CKLFQ9UBR5 152 aa3□□□□□ -1.93
MCF2-202ENST00000370573 NDRG3Q9UGV2 375 aa3□□□□□ -1.93
MCF2-202ENST00000370573 PURGQ9UJV8 347 aaKnown RBP3□□□□□ -1.93
MCF2-202ENST00000370573 A3GALT2U3KPV4 340 aa3□□□□□ -1.93
MCF2-202ENST00000370573 FAM230AA0A1W2PPH8 454 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 PQLC2LA1A4F0 135 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 FAM172BPA6NC97 362 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 C5orf52A6NGY3 159 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 IQCF6A8MYZ5 107 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 E7EQL1 145 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 BET1O15155 118 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 HPGDSO60760 199 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ELK1P19419 428 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 KITLGP21583 273 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 PRKACBP22694 351 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 TUBG1P23258 451 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 CDKN1AP38936 164 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 OR3A4PP47883 348 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 PTH2RP49190 550 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 EFNB2P52799 333 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ZP1P60852 638 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 QRFPP83859 136 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 KISS1Q15726 138 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 RAB11BQ15907 218 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 CEACAM21Q3KPI0 293 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 DDI2Q5TDH0 399 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 PLCXD3Q63HM9 321 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 GLT8D1Q68CQ7 371 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 ADAM5Q6NVV9 412 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SSX8Q7RTT4 187 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 WDR86Q86TI4 376 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 LAX1Q8IWV1 398 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 LINC00469Q8N7U9 141 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 NUP37Q8NFH4 326 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 OR8G5Q8NG78 346 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 OR51D1Q8NGF3 324 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SYNPRQ8TBG9 265 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 OR5P3Q8WZ94 311 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 FAM3DQ96BQ1 224 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 C1orf147Q96MC9 270 aaPredicted RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 PAPOLGQ9BWT3 736 aaKnown RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 MRPL37Q9BZE1 423 aaKnown RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 C6orf62Q9GZU0 229 aaPredicted RBP2.99□□□□□ -1.93
MCF2-202ENST00000370573 TUBG2Q9NRH3 451 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 SERTAD4Q9NUC0 356 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 KCNN3Q9UGI6 736 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 RNF150Q9ULK6 438 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 PKDREJQ9NTG1 2253 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 IGLV3-9A0A075B6K5 115 aa2.99□□□□□ -1.93
MCF2-202ENST00000370573 IGKV1-12A0A0C4DH73 117 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms