RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 POU3F1Q03052 451 aaPredicted RBP12.73□□□□□ -0.37
LMO4-201ENST00000370542 MELKQ14680 651 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 FAM189A2Q15884 450 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 ACTBL2Q562R1 376 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 RNASE10Q5GAN6 216 aaKnown RBP12.73□□□□□ -0.37
LMO4-201ENST00000370542 PHYHD1Q5SRE7 291 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 CYB5R2Q6BCY4 276 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 LEG1Q6P5S2 330 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 MYPOPQ86VE0 399 aaPredicted RBP12.73□□□□□ -0.37
LMO4-201ENST00000370542 C20orf196Q8IYI0 205 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 NKAIN3Q8N8D7 197 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 OR51D1Q8NGF3 324 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 TSEN15Q8WW01 171 aaKnown RBP12.73□□□□□ -0.37
LMO4-201ENST00000370542 TMEM106AQ96A25 262 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
LMO4-201ENST00000370542 C4orf45Q96LM5 186 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 TTTY10Q9BZA0 68 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 SEBOXQ9HB31 216 aaPredicted RBP12.73□□□□□ -0.37
LMO4-201ENST00000370542 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 HIF3AQ9Y2N7 669 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 PKD1L1Q8TDX9 2849 aa12.73□□□□□ -0.37
LMO4-201ENST00000370542 C5orf52A6NGY3 159 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 EIF3GO75821 320 aaKnown RBP eCLIP12.72□□□□□ -0.37
LMO4-201ENST00000370542 MAS1P04201 325 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 CELA3BP08861 270 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 SDHAP31040 664 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 SOX2P48431 317 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
LMO4-201ENST00000370542 CEACAM16Q2WEN9 425 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 TMED4Q7Z7H5 227 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 GPR137CQ8N3F9 429 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 NUDCD2Q8WVJ2 157 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 NRIP2Q9BQI9 281 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 CHMP1AQ9HD42 196 aaPredicted RBP12.72□□□□□ -0.37
LMO4-201ENST00000370542 RCC2Q9P258 522 aaKnown RBP12.72□□□□□ -0.37
LMO4-201ENST00000370542 LPAR3Q9UBY5 353 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 IKZF2Q9UKS7 526 aa12.72□□□□□ -0.37
LMO4-201ENST00000370542 IGHV2OR16-5A0A0B4J2B6 119 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 C9orf170A2RU37 121 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 SSX5O60225 188 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 RPP14O95059 124 aaKnown RBP12.71□□□□□ -0.37
LMO4-201ENST00000370542 PTHLHP12272 177 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 HLA-DOBP13765 273 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 ADCYAP1P18509 176 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 HTR2CP28335 458 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 IL13RA1P78552 427 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 FAM76BQ5HYJ3 339 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 TMEM244Q5VVB8 128 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 TMEM88Q6PEY1 159 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 ANGPTL5Q86XS5 388 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 CBLN2Q8IUK8 224 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 UEVLDQ8IX04 471 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 SMIM8Q96KF7 97 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 Q96M85 177 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 MOGAT1Q96PD6 335 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 INTS14Q96SY0 518 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 KCNK17Q96T54 332 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 PIMREGQ9BSJ6 248 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 C19orf24Q9BVV8 132 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 WDR13Q9H1Z4 485 aa12.71□□□□□ -0.37
LMO4-201ENST00000370542 TRAV8-7A0A075B6U6 113 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 COLCA2A8K830 154 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 PLPP3O14495 311 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 SPRY1O43609 319 aaPredicted RBP12.7□□□□□ -0.38
LMO4-201ENST00000370542 LMX1BO60663 402 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 ACAA1P09110 424 aaPredicted RBP12.7□□□□□ -0.38
LMO4-201ENST00000370542 ALOX5APP20292 161 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 THBS4P35443 961 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 PTGFRP43088 359 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 ATP1B3P54709 279 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 TEX30Q5JUR7 227 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 FAM209BQ5JX69 171 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 C1orf100Q5SVJ3 147 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 KCTD18Q6PI47 426 aaPredicted RBP12.7□□□□□ -0.38
LMO4-201ENST00000370542 MDP1Q86V88 176 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 OR51L1Q8NGJ5 315 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 OR8S1Q8NH09 359 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 NANPQ8TBE9 248 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 NEU4Q8WWR8 484 aaPredicted RBP12.7□□□□□ -0.38
LMO4-201ENST00000370542 MALSU1Q96EH3 234 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 FOXN4Q96NZ1 517 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 AQP10Q96PS8 301 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 TLNRD1Q9H1K6 362 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 RAB18Q9NP72 206 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 GSN-AS1Q9NRJ2 163 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 RAB22AQ9UL26 194 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 DHDHQ9UQ10 334 aa12.7□□□□□ -0.38
LMO4-201ENST00000370542 IGHV4-61A0A0C4DH41 118 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 MEX3AA1L020 520 aaKnown RBP12.69□□□□□ -0.38
LMO4-201ENST00000370542 RNASEK-C17orf49H0YIS7 233 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 FBXO24O75426 580 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 MT-ATP6P00846 226 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 ZNF14P17017 642 aaPredicted RBP12.69□□□□□ -0.38
LMO4-201ENST00000370542 KCNJ3P48549 501 aa12.69□□□□□ -0.38
LMO4-201ENST00000370542 RAB1AP62820 205 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms