RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 NAV3Q8IVL0 2385 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 TRAV1-2A0A0B4J238 106 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 A0A0G2JK05 382 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 LOC100506127A0A0U1RQW1 187 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 FUOMA2VDF0 154 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 M0R1W7 72 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 SLC17A2O00624 439 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 GEMIN2O14893 280 aaKnown RBP12.21□□□□□ -0.45
COL9A1-204ENST00000370496 IGHV4-38-2P0DP08 117 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 P2RX3P56373 397 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 ZNF273Q14593 569 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 RAB11BQ15907 218 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 MPV17LQ2QL34 196 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 C1orf100Q5SVJ3 147 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 TRAPPC6BQ86SZ2 158 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 TPRX1Q8N7U7 411 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 NEK7Q8TDX7 302 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 MRPS24Q96EL2 167 aaKnown RBP12.21□□□□□ -0.45
COL9A1-204ENST00000370496 C1orf147Q96MC9 270 aaPredicted RBP12.21□□□□□ -0.45
COL9A1-204ENST00000370496 GFI1Q99684 422 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 CHCHD6Q9BRQ6 235 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 SELENOIQ9C0D9 397 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 TXNL4BQ9NX01 149 aaKnown RBP12.21□□□□□ -0.45
COL9A1-204ENST00000370496 ING3Q9NXR8 418 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 NUP50Q9UKX7 468 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 DSCAML1Q8TD84 2053 aa12.21□□□□□ -0.45
COL9A1-204ENST00000370496 hADV38S2A0JD32 116 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 MEX3AA1L020 520 aaKnown RBP12.2□□□□□ -0.46
COL9A1-204ENST00000370496 SLC22A1O15245 554 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 BPNT1O95861 308 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 MPIG6BO95866 241 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 CSN2P05814 226 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 CCL3L1P16619 93 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 GADD45AP24522 165 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 LMO1P25800 156 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 FGF9P31371 208 aaPredicted RBP12.2□□□□□ -0.46
COL9A1-204ENST00000370496 PSMD7P51665 324 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
COL9A1-204ENST00000370496 P2RY14Q15391 338 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 TAF9Q16594 264 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 TIMM50Q3ZCQ8 353 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 KLF17Q5JT82 389 aaPredicted RBP12.2□□□□□ -0.46
COL9A1-204ENST00000370496 KRBOX4Q5JUW0 171 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 TMEM200BQ69YZ2 307 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 TMEM104Q8NE00 496 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 C22orf15Q8WYQ4 148 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 LHX4Q969G2 390 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 TMEM59Q9BXS4 323 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 OR51E2Q9H255 320 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 KCNK15Q9H427 330 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 OCEL1Q9H607 264 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 METTL8Q9H825 291 aaKnown RBP12.2□□□□□ -0.46
COL9A1-204ENST00000370496 V9GY05 133 aa12.2□□□□□ -0.46
COL9A1-204ENST00000370496 TRAV24A0A0B4J272 114 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 hCG_1809904A0A1W2PP81 198 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 A0A1W2PPE2 198 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 A0A1W2PR64 198 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 A0A1W2PRV1 198 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 SMIM18P0DKX4 95 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 ARSBP15848 533 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 RAB3BP20337 219 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 RANBP1P43487 201 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 AESQ08117 197 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 HES5Q5TA89 166 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 PDZD9Q8IXQ8 264 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 SUMF2Q8NBJ7 301 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 KCTD7Q96MP8 289 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 ZNF714Q96N38 554 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 SLC6A7Q99884 636 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 DPCDQ9BVM2 203 aaPredicted RBP12.19□□□□□ -0.46
COL9A1-204ENST00000370496 MS4A7Q9GZW8 240 aaPredicted RBP12.19□□□□□ -0.46
COL9A1-204ENST00000370496 IFT22Q9H7X7 185 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 SPACA1Q9HBV2 294 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 LINC00312Q9Y6C7 94 aa12.19□□□□□ -0.46
COL9A1-204ENST00000370496 TRGV10A0A0A0MS01 117 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 SHISA3A0PJX4 238 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 ODAMA1E959 279 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 SMIM30A4D0T7 59 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 TRIM64CA6NLI5 447 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 VSIG8P0DPA2 414 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FPR2P25090 351 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 ERP29P30040 261 aaKnown RBP12.18□□□□□ -0.46
COL9A1-204ENST00000370496 KCNJ3P48549 501 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 OR10A3P58181 314 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 PRB3Q04118 309 aaPredicted RBP12.18□□□□□ -0.46
COL9A1-204ENST00000370496 NCR3LG1Q68D85 454 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 OR10K2Q6IF99 312 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 BRD3OSQ6XYD6 125 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 TCF23Q7RTU1 214 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 Q8N7P7 452 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 KCNG3Q8TAE7 436 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 COQ2Q96H96 371 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 Q96M66 194 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 MRPS26Q9BYN8 205 aaKnown RBP12.18□□□□□ -0.46
COL9A1-204ENST00000370496 ZNF581Q9P0T4 197 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 STEAP1Q9UHE8 339 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 CUBNO60494 3623 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A10PA6NDY2 464 aa12.18□□□□□ -0.46
COL9A1-204ENST00000370496 FAM90A18PA6NE21 464 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms