RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 HOXA5P20719 270 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 IGFBP6P24592 240 aaPredicted RBP7.62□□□□□ -1.19
LCA5-201ENST00000369846 THBS4P35443 961 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 BTG2P78543 158 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 RIPPLY2Q5TAB7 128 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 LYSMD4Q5XG99 296 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 LAMTOR1Q6IAA8 161 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 LYZL2Q7Z4W2 148 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 OTOSQ8NHW6 89 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 PTPMT1Q8WUK0 201 aaPredicted RBP7.62□□□□□ -1.19
LCA5-201ENST00000369846 MISP3Q96FF7 219 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 CPEB1Q9BZB8 566 aaKnown RBP7.62□□□□□ -1.19
LCA5-201ENST00000369846 GAL3ST2Q9H3Q3 398 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 SMDT1Q9H4I9 107 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 ASCL3Q9NQ33 180 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 OBP2AQ9NY56 170 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 TINAGQ9UJW2 476 aa7.62□□□□□ -1.19
LCA5-201ENST00000369846 QSER1Q2KHR3 1735 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 HSPB2A8KAH6 182 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 RBM11P57052 281 aaKnown RBP7.61□□□□□ -1.19
LCA5-201ENST00000369846 HSPB2Q16082 182 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 DMKNQ6E0U4 476 aaPredicted RBP7.61□□□□□ -1.19
LCA5-201ENST00000369846 THSD4Q6ZMP0 1018 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 RNF165Q6ZSG1 346 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 OR10S1Q8NGN2 331 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 ZG16BQ96DA0 208 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 KCNMB2Q9Y691 235 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 PMS2P1A4D2B8 440 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 ZFAND5O76080 213 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 FUT3P21217 361 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 KLF3P57682 345 aaPredicted RBP7.61□□□□□ -1.19
LCA5-201ENST00000369846 CISD2Q8N5K1 135 aaKnown RBP7.61□□□□□ -1.19
LCA5-201ENST00000369846 C12orf76Q8N812 135 aaPredicted RBP7.61□□□□□ -1.19
LCA5-201ENST00000369846 SCCPDHQ8NBX0 429 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 FAM174AQ8TBP5 190 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 ST6GALNAC6Q969X2 333 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 S1PR3Q99500 378 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 CHRNA10Q9GZZ6 450 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 NOTCH3Q9UM47 2321 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 NCBP2LA6PVI3 153 aaKnown RBP7.61□□□□□ -1.19
LCA5-201ENST00000369846 DLEU1O43261 78 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 DNPH1O43598 174 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 SNAI2O43623 268 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 SYNGR2O43760 224 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 LEPROTL1O95214 131 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 HNRNPA1P09651 372 aaKnown RBP eCLIP7.61□□□□□ -1.19
LCA5-201ENST00000369846 BSGP35613 385 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 DLX1P56177 255 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 H2BFSP57053 126 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 MZT1Q08AG7 82 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 HES1Q14469 280 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 HNRNPA1L2Q32P51 320 aaKnown RBP7.61□□□□□ -1.19
LCA5-201ENST00000369846 ABHD17BQ5VST6 288 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 ZNF683Q8IZ20 524 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 CADM4Q8NFZ8 388 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 H1FXQ92522 213 aaKnown RBP7.61□□□□□ -1.19
LCA5-201ENST00000369846 RARRES2Q99969 163 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 TPSD1Q9BZJ3 242 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 MARCH5Q9NX47 278 aa7.61□□□□□ -1.19
LCA5-201ENST00000369846 A0A1W2PNR3 127 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 KLF4O43474 513 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 FGF18O76093 207 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 CA1P00915 261 aaPredicted RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 SELEP16581 610 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 RPS4Y1P22090 263 aaKnown RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 SRP14P37108 136 aaKnown RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 MDH2P40926 338 aaKnown RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 FHITP49789 147 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 MYBPHQ13203 477 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 MS4A6EQ96DS6 147 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 UTP23Q9BRU9 249 aaKnown RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 TMEM147Q9BVK8 224 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 CNTD2Q9H8S5 307 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 MRPS17Q9Y2R5 130 aaKnown RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 ESPL1Q14674 2120 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 M0R3E3 92 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 SMPD2O60906 423 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 SNAI1O95863 264 aaPredicted RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 GPX4P36969 197 aaPredicted RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 ARF6P62330 175 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 GNB1P62873 340 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 KLRB1Q12918 225 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 KISS1Q15726 138 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 C5orf17Q8NAS9 161 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 OR10AC1Q8NH08 325 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 SSMEM1Q8WWF3 244 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 CNRIP1Q96F85 164 aaPredicted RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 LAMTOR2Q9Y2Q5 125 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 PTRH2Q9Y3E5 179 aaKnown RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 ANKRD31Q8N7Z5 1873 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 CHD5Q8TDI0 1954 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 IGKV6D-21A0A0A0MT36 114 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 A0A0G2JLL6 359 aaPredicted RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 CRXO43186 299 aaPredicted RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 UBE2L3P68036 154 aaKnown RBP7.6□□□□□ -1.19
LCA5-201ENST00000369846 NTHL1P78549 312 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 ACVR1Q04771 509 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 PSG5Q15238 335 aa7.6□□□□□ -1.19
LCA5-201ENST00000369846 RTL8BQ17RB0 113 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms