RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 GAB4Q2WGN9 574 aa9□□□□□ -0.97
SIM1-202ENST00000369208 SYT9Q86SS6 491 aa9□□□□□ -0.97
SIM1-202ENST00000369208 RBM45Q8IUH3 476 aaKnown RBP9□□□□□ -0.97
SIM1-202ENST00000369208 OR8B3Q8NGG8 313 aa9□□□□□ -0.97
SIM1-202ENST00000369208 TLNRD1Q9H1K6 362 aa9□□□□□ -0.97
SIM1-202ENST00000369208 LAMTOR2Q9Y2Q5 125 aa9□□□□□ -0.97
SIM1-202ENST00000369208 KNL1Q8NG31 2342 aa9□□□□□ -0.97
SIM1-202ENST00000369208 POLR2AP24928 1970 aaKnown RBP9□□□□□ -0.97
SIM1-202ENST00000369208 LCN2P80188 198 aa9□□□□□ -0.97
SIM1-202ENST00000369208 ZNF252P-AS1Q0IIN9 211 aa9□□□□□ -0.97
SIM1-202ENST00000369208 SLC25A30Q5SVS4 291 aa9□□□□□ -0.97
SIM1-202ENST00000369208 ZDHHC23Q8IYP9 409 aa9□□□□□ -0.97
SIM1-202ENST00000369208 RNF133Q8WVZ7 376 aa9□□□□□ -0.97
SIM1-202ENST00000369208 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
SIM1-202ENST00000369208 ADRA2AP08913 450 aa9□□□□□ -0.97
SIM1-202ENST00000369208 CXCL2P19875 107 aa9□□□□□ -0.97
SIM1-202ENST00000369208 CLDN12P56749 244 aa9□□□□□ -0.97
SIM1-202ENST00000369208 SEC11AP67812 179 aa9□□□□□ -0.97
SIM1-202ENST00000369208 KLF9Q13886 244 aaPredicted RBP9□□□□□ -0.97
SIM1-202ENST00000369208 RAB6CQ53S08 254 aa9□□□□□ -0.97
SIM1-202ENST00000369208 ASB5Q8WWX0 329 aa9□□□□□ -0.97
SIM1-202ENST00000369208 RAB1CQ92928 201 aa9□□□□□ -0.97
SIM1-202ENST00000369208 TMEFF2Q9UIK5 374 aaPredicted RBP9□□□□□ -0.97
SIM1-202ENST00000369208 HKR1P10072 659 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 TNFSF10P50591 281 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 HOXA4Q00056 320 aaPredicted RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 ACVR1Q04771 509 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 RNFT1Q5M7Z0 435 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 Q6ZPB1 254 aaPredicted RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 SPACA9Q96E40 222 aaPredicted RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 TNFRSF13CQ96RJ3 184 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 CHODLQ9H9P2 273 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 CDX4O14627 284 aaPredicted RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 CCL7P80098 99 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 SRSF4Q08170 494 aaKnown RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 TAAR6Q96RI8 345 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 CHST8Q9H2A9 424 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 SFT2D2O95562 160 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 ORM1P02763 201 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 ALOX5APP20292 161 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 TRAT1Q6PIZ9 186 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 NUFIP2Q7Z417 695 aaKnown RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 OR5AS1Q8N127 324 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 CHST6Q9GZX3 395 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 ITGB4P16144 1822 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 UQCRFS1P47985 274 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 OR2T6Q8NHC8 308 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 OR4C45A6NMZ5 311 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 H3BVH4 76 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 P2RY10O00398 339 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 ARPC3O15145 178 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 IGF2P01344 180 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 PMELP40967 661 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 FOXK2Q01167 660 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 ZNF79Q15937 498 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 ZNF770Q6IQ21 691 aaPredicted RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 SH2D5Q6ZV89 423 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 OR1L6Q8NGR2 347 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 APOBEC3DQ96AK3 386 aaPredicted RBP8.99□□□□□ -0.97
SIM1-202ENST00000369208 CMC2Q9NRP2 79 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 HCSTQ9UBK5 93 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 ZNF391Q9UJN7 358 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 HSD17B6O14756 317 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 APCSP02743 223 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 TMEM230Q96A57 120 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 C14orf144Q96I85 54 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 KLK11Q9UBX7 282 aa8.99□□□□□ -0.97
SIM1-202ENST00000369208 M0R135 149 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 CORTO00230 105 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 EPHA8P29322 1005 aaPredicted RBP8.98□□□□□ -0.97
SIM1-202ENST00000369208 VMA21Q3ZAQ7 101 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 LHFPL4Q7Z7J7 247 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 RTN4IP1Q8WWV3 396 aaPredicted RBP8.98□□□□□ -0.97
SIM1-202ENST00000369208 ZNF799Q96GE5 643 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 BARX1Q9HBU1 254 aaPredicted RBP8.98□□□□□ -0.97
SIM1-202ENST00000369208 ONECUT1Q9UBC0 465 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 HS3ST1O14792 307 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 TYMSP04818 313 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 COX6CP09669 75 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 TMPRSS3P57727 454 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 GDF7Q7Z4P5 450 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 BHLHE23Q8NDY6 225 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 NMNAT3Q96T66 252 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 SRD5A3Q9H8P0 318 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 THYN1Q9P016 225 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 LINC00346Q8IVM7 164 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 FAM181AQ8N9Y4 354 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 OR2M7Q8NG81 312 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 OR4D9Q8NGE8 314 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 UBE2FQ969M7 185 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 ATP6V0BQ99437 205 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 SEMG1P04279 462 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 CD300LDQ6UXZ3 194 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 ADTRPQ96IZ2 230 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 NEU3Q9UQ49 428 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 NDUFS6O75380 124 aaKnown RBP8.98□□□□□ -0.97
SIM1-202ENST00000369208 PIAS2O75928 621 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 PRTGQ2VWP7 1150 aa8.98□□□□□ -0.97
SIM1-202ENST00000369208 STAC2Q6ZMT1 411 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms