RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 GPM6AP51674 278 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 LTC4SQ16873 150 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 WIPI1Q5MNZ9 446 aaPredicted RBP9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 SPATA46Q5T0L3 261 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 NSUN5P2Q63ZY6 315 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 DPPA2Q7Z7J5 298 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 OR1K1Q8NGR3 316 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 RPUSD4Q96CM3 377 aaKnown RBP9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 RAB39BQ96DA2 213 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 TMPRSS5Q9H3S3 457 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 LIME1Q9H400 295 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 SLC7A10Q9NS82 523 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 TMEM100Q9NV29 134 aa9.6□□□□□ -0.87
NECTIN4-201ENST00000368012 PMS2P1A4D2B8 440 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 RBFOX3A6NFN3 312 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 UBE2CO00762 179 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 CHST1O43916 411 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 WDR1O75083 606 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 TRGC2P03986 189 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 NDUFB7P17568 137 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 TCN2P20062 427 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 IDH3GP51553 393 aaPredicted RBP9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 DLK1P80370 383 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 FREM1Q5H8C1 2179 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 SPANXN5Q5MJ07 72 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 DTX1Q86Y01 620 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 OR10AD1Q8NGE0 317 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 PP6455Q8WZ26 134 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 CCL28Q9NRJ3 127 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 AURKAIP1Q9NWT8 199 aaPredicted RBP9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 A0A087WZY1 265 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 C3orf85A0A1B0GTC6 90 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 C9J4A7 227 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 METTL15P1P0C7V9 234 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 NR2C1P13056 603 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 THBS4P35443 961 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 ZNF133P52736 654 aaPredicted RBP9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 SLC25A47Q6Q0C1 308 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 D2HGDHQ8N465 521 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 ZNF611Q8N823 705 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 OR2M3Q8NG83 312 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 SDSLQ96GA7 329 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 THOC3Q96J01 351 aaKnown RBP9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 IER2Q9BTL4 223 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 GAR1Q9NY12 217 aaKnown RBP9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 RNF150Q9ULK6 438 aa9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 PTPRZ1P23471 2315 aaPredicted RBP9.59□□□□□ -0.87
NECTIN4-201ENST00000368012 GDF1P27539 372 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 S100GP29377 79 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 CASP6P55212 293 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 GAMTQ14353 236 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 SURF2Q15527 256 aaPredicted RBP9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 HMGN3Q15651 99 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 TCEAL6Q6IPX3 200 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 MRPL21Q7Z2W9 205 aaKnown RBP9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 TBC1D26Q86UD7 250 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 GAPTQ8N292 157 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 EXTL1Q92935 676 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 MRPL13Q9BYD1 178 aaKnown RBP9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 IL36RNQ9UBH0 155 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 MTCH2Q9Y6C9 303 aa9.59□□□□□ -0.88
NECTIN4-201ENST00000368012 PRR14LQ5THK1 2151 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 P04436 131 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 SCTP09683 121 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 PRF1P14222 555 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 ZP4Q12836 540 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 ZNF266Q14584 549 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 ZNF468Q5VIY5 522 aaPredicted RBP9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 RPS19BP1Q86WX3 136 aaKnown RBP9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 SNX22Q96L94 193 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 C1orf147Q96MC9 270 aaPredicted RBP9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 TCEAL7Q9BRU2 100 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 RSG1Q9BU20 258 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 CHST5Q9GZS9 411 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 C5orf49A4QMS7 147 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 CRYM-AS1A6NIL9 109 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 TUSC2O75896 110 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 SPINK9Q5DT21 86 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 SPNS3Q6ZMD2 512 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 SYT13Q7L8C5 426 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 TWSG1Q9GZX9 223 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 DOK5Q9P104 306 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 OR14J1Q9UGF5 321 aa9.58□□□□□ -0.88
NECTIN4-201ENST00000368012 A0A0J9YW62 118 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 PPYP01298 95 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 MSX1P28360 303 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 P2RY1P47900 373 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 NXPH1P58417 271 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 RND3P61587 244 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 PMP22Q01453 160 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 ZNF92Q03936 586 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 RAB30Q15771 203 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 IL22RA1Q8N6P7 574 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 CCDC74BQ96LY2 380 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 WFIKKN1Q96NZ8 548 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 SSX3Q99909 188 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 ZNF816-ZNF321PA0A0X1KG74 233 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 CCL4P13236 92 aa9.57□□□□□ -0.88
NECTIN4-201ENST00000368012 FAM3AP98173 230 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms