RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 FAM46BQ96A09 425 aa8.14□□□□□ -1.11
NUP43-202ENST00000367402 WDFY2Q96P53 400 aa8.14□□□□□ -1.11
NUP43-202ENST00000367402 CHCHD6Q9BRQ6 235 aa8.14□□□□□ -1.11
NUP43-202ENST00000367402 OR51E2Q9H255 320 aa8.14□□□□□ -1.11
NUP43-202ENST00000367402 BANF2Q9H503 90 aa8.14□□□□□ -1.11
NUP43-202ENST00000367402 TXNL4BQ9NX01 149 aaKnown RBP8.14□□□□□ -1.11
NUP43-202ENST00000367402 ING3Q9NXR8 418 aa8.14□□□□□ -1.11
NUP43-202ENST00000367402 GHRLQ9UBU3 117 aa8.14□□□□□ -1.11
NUP43-202ENST00000367402 SSR3Q9UNL2 185 aa8.14□□□□□ -1.11
NUP43-202ENST00000367402 SONP18583 2426 aaKnown RBP8.13□□□□□ -1.11
NUP43-202ENST00000367402 FN1P02751 2386 aaKnown RBP8.13□□□□□ -1.11
NUP43-202ENST00000367402 MALRD1Q5VYJ5 2156 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 TRAV1-2A0A0B4J238 106 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 LOC100506127A0A0U1RQW1 187 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 MEX3AA1L020 520 aaKnown RBP8.13□□□□□ -1.11
NUP43-202ENST00000367402 MGST3O14880 152 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 GEMIN2O14893 280 aaKnown RBP8.13□□□□□ -1.11
NUP43-202ENST00000367402 SLC22A1O15245 554 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 OR7C1O76099 320 aaPredicted RBP8.13□□□□□ -1.11
NUP43-202ENST00000367402 IFNA2P01563 188 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 UBBP0CG47 229 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 GADD45AP24522 165 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 LMO1P25800 156 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 FGF9P31371 208 aaPredicted RBP8.13□□□□□ -1.11
NUP43-202ENST00000367402 PSMD7P51665 324 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 RBM11P57052 281 aaKnown RBP8.13□□□□□ -1.11
NUP43-202ENST00000367402 RIPPLY3P57055 190 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 SCGB2A2Q13296 93 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 P2RY14Q15391 338 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 RAB11BQ15907 218 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 TAF9Q16594 264 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 PAN3Q58A45 887 aaKnown RBP8.13□□□□□ -1.11
NUP43-202ENST00000367402 C1orf100Q5SVJ3 147 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 ATAD3CQ5T2N8 411 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 VMO1Q7Z5L0 202 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 BPIFB2Q8N4F0 458 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 TPRX1Q8N7U7 411 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 TMEM104Q8NE00 496 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 OR6M1Q8NGM8 313 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 UPRTQ96BW1 309 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 DMRTB1Q96MA1 342 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 GFI1Q99684 422 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 SELENOIQ9C0D9 397 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 SIRPDQ9H106 197 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 CST11Q9H112 138 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 PPA2Q9H2U2 334 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 NUP50Q9UKX7 468 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 KPTNQ9Y664 436 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 V9GY05 133 aa8.13□□□□□ -1.11
NUP43-202ENST00000367402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.12□□□□□ -1.112e-6■■■■■ 49.7
NUP43-202ENST00000367402 TRAV24A0A0B4J272 114 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 hADV38S2A0JD32 116 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 SHISA3A0PJX4 238 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 FUOMA2VDF0 154 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 MPIG6BO95866 241 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 IGHV4-38-2P0DP08 117 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 CD37P11049 281 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 MMP9P14780 707 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 ARSBP15848 533 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 MGMTP16455 207 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 JUNBP17275 347 aaPredicted RBP8.12□□□□□ -1.11
NUP43-202ENST00000367402 RAB3BP20337 219 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 EPHA1P21709 976 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 ERP29P30040 261 aaKnown RBP8.12□□□□□ -1.11
NUP43-202ENST00000367402 AESQ08117 197 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 ATXN7L3Q14CW9 347 aaPredicted RBP8.12□□□□□ -1.11
NUP43-202ENST00000367402 NHLRC3Q5JS37 347 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 KLF17Q5JT82 389 aaPredicted RBP8.12□□□□□ -1.11
NUP43-202ENST00000367402 HES5Q5TA89 166 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 GPR157Q5UAW9 335 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 OR10K2Q6IF99 312 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 TRAPPC6BQ86SZ2 158 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 LINC00596Q86U02 117 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 PDZD9Q8IXQ8 264 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 KIR3DL3Q8N743 410 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 SUMF2Q8NBJ7 301 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 C22orf15Q8WYQ4 148 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 LHX4Q969G2 390 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 MRPS24Q96EL2 167 aaKnown RBP8.12□□□□□ -1.11
NUP43-202ENST00000367402 POM121Q96HA1 1249 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 C1orf147Q96MC9 270 aaPredicted RBP8.12□□□□□ -1.11
NUP43-202ENST00000367402 KCTD7Q96MP8 289 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 TBX15Q96SF7 602 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 MS4A7Q9GZW8 240 aaPredicted RBP8.12□□□□□ -1.11
NUP43-202ENST00000367402 SIRT7Q9NRC8 400 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 ZNF581Q9P0T4 197 aa8.12□□□□□ -1.11
NUP43-202ENST00000367402 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 TRAV40A0A0B4J280 105 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 CENPVL3A0A0U1RRI6 287 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 hCG_1809904A0A1W2PP81 198 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 A0A1W2PPE2 198 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 A0A1W2PR64 198 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 A0A1W2PRV1 198 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 SMIM30A4D0T7 59 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 TRIM64CA6NLI5 447 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 M0R1W7 72 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 SLC17A2O00624 439 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 BPNT1O95861 308 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 FSHBP01225 129 aa8.11□□□□□ -1.11
NUP43-202ENST00000367402 CCL3L1P16619 93 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms