RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 BPIFA4PQ86YQ2 179 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ASB10Q8WXI3 467 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 LGALS7P47929 136 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 HYAL1Q12794 435 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TGIF1Q15583 401 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CIARTQ8N365 385 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 C4orf36Q96KX1 117 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 OR6C3Q9NZP0 311 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1B0GWJ7 208 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 MPPED1O15442 326 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 OTX2P32243 289 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 STARD4Q96DR4 205 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 NTNG1Q9Y2I2 539 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 GPR52Q9Y2T5 361 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 UBR1Q8IWV7 1749 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 APOMO95445 188 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 INAFM2P0DMQ5 153 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PCP4P48539 62 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CTXN1P60606 82 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 HRASLSQ9HDD0 168 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CDK5RAP2Q96SN8 1893 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CDC42EP2O14613 210 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 RNF224P0DH78 156 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 MPGP29372 298 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 OR2M7Q8NG81 312 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 OR8B12Q8NGG6 310 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 NT5CQ8TCD5 201 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PLCXD2Q0VAA5 305 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 HSPB3Q12988 150 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 OR52M1Q8NGK5 317 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 WDR83Q9BRX9 315 aaKnown RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 SLC25A10Q9UBX3 287 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 KAT6AQ92794 2004 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 AMTP48728 403 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 SRSF1Q07955 248 aaKnown RBP eCLIP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 DUX1O43812 170 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 LTC4SQ16873 150 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ALKAL1Q6UXT8 129 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 SLC25A44Q96H78 314 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 A0A0B4J2E0 115 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 A0A1B0GX12 115 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 STAC2Q6ZMT1 411 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TMPRSS7Q7RTY8 843 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TRMT61AQ96FX7 289 aaKnown RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 GSN-AS1Q9NRJ2 163 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 FBXL17Q9UF56 701 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 HSPB6O14558 160 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 OR13C7P0DN81 318 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 RHBDD2Q6NTF9 364 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 OR13C6PQ8NH95 151 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 NAA60Q9H7X0 242 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 A6NCN8 305 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 SUSD5O60279 629 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CST7O76096 145 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 SNRPBP14678 240 aaKnown RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 C10orf91Q5T1B1 145 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF524Q96C55 264 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 HS3ST3A1Q9Y663 406 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 GZMHP20718 246 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 BTLAQ7Z6A9 289 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CYB5D2Q8WUJ1 264 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CLEC4DQ8WXI8 215 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM37Q8WXS4 190 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 MBNL1Q9NR56 388 aaKnown RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 NOGQ13253 232 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TXNRD2Q9NNW7 524 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 MRPL16Q9NX20 251 aaKnown RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ZBTB42B2RXF5 422 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PRAMEF26H0Y7S4 382 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PRAMEF5Q5TYX0 476 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PRAMEF6Q5VXH4 476 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 POM121L2Q96KW2 1035 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 LPAR4Q99677 370 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TIAM2Q8IVF5 1701 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TRBV5-5A0A0J9YX44 114 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MEX3AA1L020 520 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 GAGE10A6NGK3 116 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 SEC13P55735 322 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 RGS7BPQ6MZT1 257 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MUC15Q8N387 334 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 CHST14Q8NCH0 376 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF681Q96N22 645 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR5V1Q9UGF6 321 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 MPC1Q9Y5U8 109 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ANKRD26Q9UPS8 1709 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 DIDO1Q9BTC0 2240 aaKnown RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 A0A0J9YY10 115 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 SFT2D2O95562 160 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 TSPAN7P41732 249 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 DAPP51397 102 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 FTH1P19P0C7X4 201 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 SHBQ15464 509 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR2Y1Q8NGV0 311 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 OR11L1Q8NGX0 322 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 NKX2-6A6NCS4 301 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 M0QXV9 152 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 GALR2O43603 387 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-207ENST00000367255 CEACAM5P06731 702 aa3.32□□□□□ -1.88
SYNE1-207ENST00000367255 ELOVL1Q9BW60 279 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms