RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TSPAN31Q12999 210 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 KLF10Q13118 480 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 C17orf58Q2M2W7 97 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 COQ5Q5HYK3 327 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 ZNF684Q5T5D7 378 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 ACSM6Q6P461 480 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 TRAPPC6BQ86SZ2 158 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 ZNF573Q86YE8 665 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 STON2Q8WXE9 905 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 SLAMF9Q96A28 289 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 CADM1Q9BY67 442 aaKnown RBP6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 HIPK2Q9H2X6 1198 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 SLC7A11Q9UPY5 501 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 FAT2Q9NYQ8 4349 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 A0A0U1RQV5 110 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 ATP5HO75947 161 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 GADD45GO95257 159 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 HAND1O96004 215 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 NPPAP01160 153 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 SEMG1P04279 462 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 PPIFP30405 207 aaKnown RBP6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 NPBWR2P48146 333 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 ARHGDIBP52566 201 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 ARPC4P59998 168 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 ZNF91Q05481 1191 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 MFGE8Q08431 387 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 RIPPLY1Q0D2K3 151 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 IL24Q13007 206 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 CBX3Q13185 183 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 EBI3Q14213 229 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 THOC7Q6I9Y2 204 aaKnown RBP6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 CCDC144NLQ6NUI1 221 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 LYPD6Q86Y78 171 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 OR9Q2Q8NGE9 314 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 OTOSQ8NHW6 89 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 THEM6Q8WUY1 208 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 CORO2AQ92828 525 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 TOMM40LQ969M1 308 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 COQ2Q96H96 371 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 EAF1Q96JC9 268 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 KCTD7Q96MP8 289 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 MNTQ99583 582 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 BTBD10Q9BSF8 475 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 THAP7Q9BT49 309 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 RBFOX1Q9NWB1 397 aaKnown RBP6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 IL20Q9NYY1 176 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 DNAJB9Q9UBS3 223 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 POLDIP2Q9Y2S7 368 aa6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 FAM32AQ9Y421 112 aaKnown RBP6.5□□□□□ -1.37
HMGB1P39-201ENST00000366304 TNCP24821 2201 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 A0A1B0GTI1 187 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 ZNF736B4DX44 427 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 G3V318 75 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 TOR1AO14656 332 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 MGST3O14880 152 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 SLC25A17O43808 307 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 EDF1O60869 148 aaKnown RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 IFNA6P05013 189 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 CGB3P0DN86 165 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 CGB7P0DN87 165 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 ARSBP15848 533 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 PEX2P28328 305 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 ERP29P30040 261 aaKnown RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 SNU13P55769 128 aaKnown RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 EWSR1Q01844 656 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 AESQ08117 197 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 RNLSQ5VYX0 342 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 OR52W1Q6IF63 320 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 LINC00322Q6ZN03 302 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 ZNF554Q86TJ5 538 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 TGIF2LXQ8IUE1 241 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 OR6Q1Q8NGQ2 317 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 IL17DQ8TAD2 202 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 GNPDA2Q8TDQ7 276 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 FAM162AQ96A26 154 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 RPEQ96AT9 228 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 RCN3Q96D15 328 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 KIRREL1Q96J84 757 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 CEP19Q96LK0 163 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 UBE2E2Q96LR5 201 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 SIKE1Q9BRV8 207 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 TSSK6Q9BXA6 273 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 PKIBQ9C010 78 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 PBOV1Q9GZY1 135 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 CCDC134Q9H6E4 229 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 DCAF13Q9NV06 445 aaKnown RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 ARMC1Q9NVT9 282 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 ENPP5Q9UJA9 477 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 V9GYQ6 96 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 DYNC1H1Q14204 4646 aaKnown RBP6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 DNAH2Q9P225 4427 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 HERC1Q15751 4861 aa6.49□□□□□ -1.37
HMGB1P39-201ENST00000366304 IGHV4OR15-8A0A075B7B6 117 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 A0A087WW49 117 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 TRGV10A0A0A0MS01 117 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 A0A1W2PPE3 182 aa6.48□□□□□ -1.37
HMGB1P39-201ENST00000366304 FAM230AA0A1W2PPH8 454 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms