RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MOGAT2Q3SYC2 334 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 Q5BKY6 102 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 GAPTQ8N292 157 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 OR2D2Q9H210 308 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 SPTAN1Q13813 2472 aaKnown RBP12.06□□□□□ -0.48
VCP-201ENST00000358901 MDC1Q14676 2089 aaKnown RBP12.06□□□□□ -0.48
VCP-201ENST00000358901 TRBV5-5A0A0J9YX44 114 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 SYNGR2O43760 224 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 ZNF737O75373 536 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 SPP1P10451 314 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 CTRB1P17538 263 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 IL11P20809 199 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 IL24Q13007 206 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 NCMAPQ5T1S8 102 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 CTRB2Q6GPI1 263 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 DYRK2Q92630 601 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 CCL28Q9NRJ3 127 aa12.06□□□□□ -0.48
VCP-201ENST00000358901 CRYBA1P05813 215 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 P2RY1P47900 373 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
VCP-201ENST00000358901 WDR74Q6RFH5 385 aaPredicted RBP12.05□□□□□ -0.48
VCP-201ENST00000358901 ETV3LQ6ZN32 361 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
VCP-201ENST00000358901 MRGPRDQ8TDS7 321 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 USB1Q9BQ65 265 aaKnown RBP12.05□□□□□ -0.48
VCP-201ENST00000358901 CHST5Q9GZS9 411 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 ZNF835Q9Y2P0 537 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 NBASA2RRP1 2371 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 HSBP1O75506 76 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 MEOX1P50221 254 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 ZNF345Q14585 488 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 SMUG1Q53HV7 270 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 LYG1Q8N1E2 194 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 OR13G1Q8NGZ3 307 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 ABHD3Q8WU67 409 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 PTX4Q96A99 478 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 GINS3Q9BRX5 216 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 TMEM9BQ9NQ34 198 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 SPINK4O60575 86 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 SSPNQ14714 243 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 TMEM65Q6PI78 240 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 OR2M3Q8NG83 312 aa12.05□□□□□ -0.48
VCP-201ENST00000358901 GPX7Q96SL4 187 aaPredicted RBP12.05□□□□□ -0.48
VCP-201ENST00000358901 AP4M1O00189 453 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 FOSL1P15407 271 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 ZNF154Q13106 437 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 ZNF766Q5HY98 468 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 POM121L2Q96KW2 1035 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 LRFN3Q9BTN0 628 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 SF3B5Q9BWJ5 86 aaKnown RBP12.04□□□□□ -0.48
VCP-201ENST00000358901 CACFD1Q9UGQ2 172 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 TRAPPC1Q9Y5R8 145 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 DOPEY2Q9Y3R5 2298 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 NKX2-6A6NCS4 301 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 RCC1P18754 421 aaPredicted RBP12.04□□□□□ -0.48
VCP-201ENST00000358901 HOGA1Q86XE5 327 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 SLC22A18ASQ8N1D0 253 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 OR10G4Q8NGN3 311 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 OR10G9Q8NGN4 311 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 OR10G7Q8NGN6 311 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 PRO1933Q9H354 126 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 MPC1Q9Y5U8 109 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 COX7A2P2O60397 106 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 CTSBP07858 339 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 GALR1P47211 349 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 MPV17LQ2QL34 196 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 CPEB3Q8NE35 698 aaKnown RBP12.04□□□□□ -0.48
VCP-201ENST00000358901 MED12Q93074 2177 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 MPLP40238 635 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 ZNF83P51522 516 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 BPIFB3P59826 476 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 ROM1Q03395 351 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 COL19A1Q14993 1142 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 RGP1Q92546 391 aaPredicted RBP12.04□□□□□ -0.48
VCP-201ENST00000358901 C10orf35Q96D05 121 aa12.04□□□□□ -0.48
VCP-201ENST00000358901 TRAV17A0A0B4J275 112 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 A0A1W2PNV4 684 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 CLEC3BP05452 202 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 TUSC5Q8IXB3 177 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 TRDCB7Z8K6 153 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 LMX1BO60663 402 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 CSN1S1P47710 185 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 CDC34P49427 236 aaPredicted RBP12.03□□□□□ -0.48
VCP-201ENST00000358901 FAM3AP98173 230 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 EWSR1Q01844 656 aaKnown RBP eCLIP12.03□□□□□ -0.48
VCP-201ENST00000358901 STUMQ69YW2 141 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 NPAS1Q99742 590 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 CDIPTO14735 213 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 CDS2O95674 445 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 RAB5AP20339 215 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 GNG10P50151 68 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 SULT1A1P50225 295 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 H2BFSP57053 126 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 ZNF362Q5T0B9 420 aaPredicted RBP12.03□□□□□ -0.48
VCP-201ENST00000358901 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 SLC7A10Q9NS82 523 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 PLXNB2O15031 1838 aa12.03□□□□□ -0.48
VCP-201ENST00000358901 GREB1LQ9C091 1923 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms