RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 TOLLIPQ9H0E2 274 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM167BQ9NRX6 74 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 RASL12Q9NYN1 266 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF32P17041 273 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 GABRG2P18507 467 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 HIST3H3Q16695 136 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM128Q5BJH2 165 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 COL13A1Q5TAT6 717 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-202ENST00000358808 Q7L0L9 218 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 OR5C1Q8NGR4 320 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 R3HDM4Q96D70 268 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 NEURL2Q9BR09 285 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ATG101Q9BSB4 218 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ARID1AO14497 2285 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 CDRT15L2A8MXV6 281 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 MBTPS2O43462 519 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 HOXC4P09017 264 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ELOBQ15370 118 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 LRP11Q86VZ4 500 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ISG20L2Q9H9L3 353 aaKnown RBP9.04□□□□□ -0.96
CLIP1-202ENST00000358808 AKIRIN1Q9H9L7 192 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ADAMTSL1Q8N6G6 1762 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 IGHV3-21A0A0B4J1V1 117 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 LILRA5A6NI73 299 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 PGA3P0DJD8 388 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 CD96P40200 585 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 TCTAP57738 103 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 C10orf113Q5VZT2 155 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 ANKRD37Q7Z713 158 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
CLIP1-202ENST00000358808 HMX2A2RU54 273 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 AKR7A2O43488 359 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 GFRA1P56159 465 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 B2MP61769 119 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 PSG5Q15238 335 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 TM4SF20Q53R12 229 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 KIRREL2Q6UWL6 708 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 CADM4Q8NFZ8 388 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 ZFP64Q9NPA5 681 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 NRXN2Q9P2S2 1712 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM262E9PQX1 116 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 TNFSF14O43557 240 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 DEDDO75618 318 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 ALX3O95076 343 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 SPINK2P20155 84 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 RPL29P47914 159 aaKnown RBP9.03□□□□□ -0.96
CLIP1-202ENST00000358808 RAB9AP51151 201 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 ERVS71-1P61550 626 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 TMED3Q9Y3Q3 217 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 CROCCQ5TZA2 2017 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 GALNSP34059 522 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 GPR6P46095 362 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-202ENST00000358808 GP2P55259 537 aaKnown RBP9.03□□□□□ -0.96
CLIP1-202ENST00000358808 WNT3P56703 355 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 KISS1Q15726 138 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 C3AR1Q16581 482 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 WDR25Q64LD2 544 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-202ENST00000358808 SPINK14Q6IE38 97 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 OR4X1Q8NH49 305 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 ASB5Q8WWX0 329 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 NTNG2Q96CW9 530 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 ARHGAP5-AS1Q96IT6 56 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 A0A1B0GUH1 482 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 SNRPGP15A8MWD9 76 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 CST4P01036 141 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 PF4V1P10720 104 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 TFF2Q03403 129 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 FAM26EQ8N5C1 309 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 ZBTB44Q8NCP5 570 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 CT55Q8WUE5 264 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 STARD4Q96DR4 205 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 WDR89Q96FK6 387 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-202ENST00000358808 RAX2Q96IS3 184 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 MRGPRX3Q96LB0 322 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 TP53RKQ96S44 253 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF665Q9H7R5 613 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 PRDM7Q9NQW5 492 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 RNF7Q9UBF6 113 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 MMP24Q9Y5R2 645 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 MPDU1O75352 247 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 DHRS3O75911 302 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 TWIST1Q15672 202 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 FAM53AQ6NSI3 398 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-202ENST00000358808 JMJD6Q6NYC1 403 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-202ENST00000358808 ZNF343Q6P1L6 599 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 WDR74Q6RFH5 385 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-202ENST00000358808 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 C16orf82Q7Z2V1 217 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 FAM219AQ8IW50 185 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 TMEM251Q8N6I4 163 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 OR1L6Q8NGR2 347 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 OR10J6PQ8NGY7 276 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 PARP11Q9NR21 331 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 CLN8Q9UBY8 286 aa9.03□□□□□ -0.96
CLIP1-202ENST00000358808 LOC389332A0A1B0GUA5 103 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 PPP1R17O96001 155 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 IL9P15248 144 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 SKP2Q13309 424 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 ASAH1Q13510 395 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 MMDQ15546 238 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms