RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 NARS2Q96I59 477 aaKnown RBP12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 LPAR3Q9UBY5 353 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 KCNIP3Q9Y2W7 256 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF850A8MQ14 1090 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 CDK2AP1O14519 115 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 GEMIN2O14893 280 aaKnown RBP12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 KCNAB3O43448 404 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 HLA-HP01893 362 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 GAPDHP04406 335 aaKnown RBP12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 SFTPBP07988 381 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 CTRB1P17538 263 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 S100A10P60903 97 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 RNPS1Q15287 305 aaKnown RBP12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 C3AR1Q16581 482 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 C10orf91Q5T1B1 145 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 CTRB2Q6GPI1 263 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 ATRAIDQ6UW56 229 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 TMEM200AQ86VY9 491 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 FBXL14Q8N1E6 418 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 SVBPQ8N300 66 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 GALNT14Q96FL9 552 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 ZFP57Q9NU63 452 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 GSKIPQ9P0R6 139 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 CARHSP1Q9Y2V2 147 aaKnown RBP12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 RTTNQ86VV8 2226 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 TRAV17A0A0B4J275 112 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 TOR1AO14656 332 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 ABCD4O14678 606 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 ACTL6AO96019 429 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 CST4P01036 141 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF728P0DKX0 622 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 HKR1P10072 659 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 UCP3P55916 312 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 TLE1Q04724 770 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF766Q5HY98 468 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 MCEMP1Q8IX19 187 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 LRTM2Q8N967 370 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 OR10AD1Q8NGE0 317 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 OR51F2Q8NH61 342 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 SMIM8Q96KF7 97 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 SUCNR1Q9BXA5 334 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 PLEKHA2Q9HB19 425 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF629Q9UEG4 869 aaPredicted RBP12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 LIPGQ9Y5X9 500 aa12.28□□□□□ -0.44
NIPAL3-203ENST00000358028 FAM90A10PA6NDY2 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A18PA6NE21 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 ZNF503-AS2A6NEH8 195 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A16PA6NEW6 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A20PA6NIJ5 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A8PA6NJQ4 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A7PA6NKC0 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A22PA8MWA6 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A12PA8MX19 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A5PA8MXJ8 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A23PA8MXZ1 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 PDCD6O75340 191 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 DEDDO75618 318 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A15PP0C7V4 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A13PP0C7W8 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A14PP0C7W9 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM90A24PP0C7X0 464 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 CD46P15529 392 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 CCNOP22674 350 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 PJVKQ0ZLH3 352 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 NUFIP2Q7Z417 695 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 CLRN3Q8NCR9 226 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 BHLHE23Q8NDY6 225 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 OR56B2PQ8NGI1 322 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 TSNAXQ99598 290 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 AIFM2Q9BRQ8 373 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 REPIN1Q9BWE0 567 aaKnown RBP12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 NAA60Q9H7X0 242 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 ZNF286AQ9HBT8 521 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 ACKR4Q9NPB9 350 aa12.27□□□□□ -0.45
NIPAL3-203ENST00000358028 PTPN13Q12923 2485 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 C5orf49A4QMS7 147 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 ZNF705EA8MWA4 302 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 PRSS44E7EML9 344 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 K7EPK0 472 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 TPD52L2O43399 206 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 JTBO76095 146 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 RPL12P30050 165 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 OPRM1P35372 400 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 ARR3P36575 388 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 RBM11P57052 281 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 BLOC1S1P78537 153 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 PMP22Q01453 160 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 MALLQ13021 153 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 SLC10A1Q14973 349 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 ABCA11PQ4W5N1 156 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 GGNBP1Q5YKI7 109 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 TMEM211Q6ICI0 200 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 MRPL21Q7Z2W9 205 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 CALHM1Q8IU99 346 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 CISD2Q8N5K1 135 aaKnown RBP12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 FAM71E2Q8N5Q1 922 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 ZNF611Q8N823 705 aa12.26□□□□□ -0.45
NIPAL3-203ENST00000358028 ZFP62Q8NB50 900 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms