RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 RNF212Q495C1 297 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 ZNF787Q6DD87 383 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 COMMD1Q8N668 190 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 APH1AQ96BI3 265 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 SPSB2Q99619 263 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 RARRES2Q99969 163 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 TOLLIPQ9H0E2 274 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 FAM234AQ9H0X4 552 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 OBP2BQ9NPH6 170 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 CCL28Q9NRJ3 127 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 GFOD1Q9NXC2 390 aa5.95□□□□□ -1.46
RTN4-203ENST00000357376 CARHSP1Q9Y2V2 147 aaKnown RBP5.95□□□□□ -1.46
RTN4-203ENST00000357376 A0A1W2PQM1 296 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 A0A1W2PR80 420 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 RBFOX3A6NFN3 312 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 CHST1O43916 411 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 SEC11BP0C7V7 166 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 METTL15P1P0C7V9 234 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 ACKR3P25106 362 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 RAB1AP62820 205 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 FAM3AP98173 230 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 BAXQ07812 192 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 PHYHD1Q5SRE7 291 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 OR10D4PQ8NGN7 298 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 HLA-CQ95604 372 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 HIST1H2BAQ96A08 127 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 Q96M66 194 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 POMT1Q9Y6A1 747 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 KIAA1549LQ6ZVL6 1849 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 FGF16O43320 207 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 YIF1AO95070 293 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 SCAF4O95104 1147 aaKnown RBP5.94□□□□□ -1.46
RTN4-203ENST00000357376 BCL3P20749 454 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 EIF2S3P41091 472 aaKnown RBP5.94□□□□□ -1.46
RTN4-203ENST00000357376 RAC3P60763 192 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 CXorf66Q5JRM2 361 aaPredicted RBP5.94□□□□□ -1.46
RTN4-203ENST00000357376 C9orf152Q5JTZ5 239 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 OR2T2Q6IF00 324 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 DNM1P46Q6ZS02 220 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 ZNF441Q8N8Z8 693 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 CYTL1Q9NRR1 136 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 CACNA1DQ01668 2161 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 WIPF3A6NGB9 483 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 NPIPB13A6NJU9 1138 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 NPIPB4C9JG80 1138 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 F8VVB4 439 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 F8VWA3 439 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 AP4M1O00189 453 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 TERTO14746 1132 aaKnown RBP5.94□□□□□ -1.46
RTN4-203ENST00000357376 GAPDHP04406 335 aaKnown RBP5.94□□□□□ -1.46
RTN4-203ENST00000357376 FOSL2P15408 326 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 PSG4Q00888 419 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 ENDOGQ14249 297 aaKnown RBP5.94□□□□□ -1.46
RTN4-203ENST00000357376 CST9LP1Q5W188 147 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 C1orf87Q8N0U7 546 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 UBAC2Q8NBM4 344 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 LHX4Q969G2 390 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 TVP23CQ96ET8 276 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 LYZL4Q96KX0 146 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 ZNF488Q96MN9 340 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 SMOC1Q9H4F8 434 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 TMEM38BQ9NVV0 291 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 GAR1Q9NY12 217 aaKnown RBP5.94□□□□□ -1.46
RTN4-203ENST00000357376 WASF3Q9UPY6 502 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 GPR179Q6PRD1 2367 aa5.94□□□□□ -1.46
RTN4-203ENST00000357376 H3BQ15 152 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 SRSF10O75494 262 aaKnown RBP5.93□□□□□ -1.46
RTN4-203ENST00000357376 CSRP1P21291 193 aaKnown RBP5.93□□□□□ -1.46
RTN4-203ENST00000357376 DTYMKP23919 212 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 NPBWR2P48146 333 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 ARG2P78540 354 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 PMP22Q01453 160 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 CLN3Q13286 438 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 IZUMO4Q1ZYL8 232 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 MPV17LQ2QL34 196 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 CNEP1R1Q8N9A8 125 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 PLPPR2Q96GM1 343 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 CABLES2Q9BTV7 478 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 PCED1AQ9H1Q7 454 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 PSENENQ9NZ42 101 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 PATE3B3GLJ2 98 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 FBP1P09467 338 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 NAT2P11245 290 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 SNCAP37840 140 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 QRFPP83859 136 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 ZXDAP98168 799 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 FAM27BQ5VT28 67 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 SPINK14Q6IE38 97 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 ZNF574Q6ZN55 896 aaPredicted RBP5.93□□□□□ -1.46
RTN4-203ENST00000357376 ZNF610Q8N9Z0 462 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 NFAM1Q8NET5 270 aaPredicted RBP5.93□□□□□ -1.46
RTN4-203ENST00000357376 NANOS1Q8WY41 292 aaKnown RBP5.93□□□□□ -1.46
RTN4-203ENST00000357376 MRGPRFQ96AM1 343 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 NTNG2Q96CW9 530 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 BSCL2Q96G97 398 aaPredicted RBP5.93□□□□□ -1.46
RTN4-203ENST00000357376 SMIM8Q96KF7 97 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 NUDT16L1Q9BRJ7 211 aaKnown RBP5.93□□□□□ -1.46
RTN4-203ENST00000357376 SRXN1Q9BYN0 137 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 OR2H1Q9GZK4 316 aa5.93□□□□□ -1.46
RTN4-203ENST00000357376 BARX1Q9HBU1 254 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms