RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 PGAM5Q96HS1 289 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 RPP25Q9BUL9 199 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 SLC7A11Q9UPY5 501 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 VSTM2BA6NLU5 285 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 IGHV4-34P06331 123 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 GLI4P10075 376 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 COX5BP10606 129 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 TAS2R30P59541 319 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 FXYD4P59646 89 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 HIST1H3AP68431 136 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 ID3Q02535 119 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 C1orf61Q13536 156 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 CENPVQ7Z7K6 275 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 H1FOOQ8IZA3 346 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 CCDC71LQ8N9Z2 235 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 OR1P1Q8NH06 330 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 ZNF845Q96IR2 970 aaPredicted RBP10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 DDA1Q9BW61 102 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 TDRD6O60522 2096 aaKnown RBP10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 C3orf85A0A1B0GTC6 90 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 EREGO14944 169 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 MPPED1O15442 326 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 RUNX1Q01196 453 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 CDCP2Q5VXM1 449 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 OR10A7Q8NGE5 316 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 POC1BQ8TC44 478 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 CA5BP1Q8WTZ4 195 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 PIGTQ969N2 578 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 TPSD1Q9BZJ3 242 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 PLSCR2Q9NRY7 297 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 WASF3Q9UPY6 502 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 PIGLQ9Y2B2 252 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 B3GALT1Q9Y5Z6 326 aa10.48□□□□□ -0.73
SMARCAL1-201ENST00000357276 C2orf72A6NCS6 295 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 SHISA7A6NL88 538 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 B4DGG1 531 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 ZNF814B7Z6K7 855 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 ONECUT2O95948 504 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 PFN1P07737 140 aaKnown RBP10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 TNFRSF9Q07011 255 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 SLC10A1Q14973 349 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 NSDHLQ15738 373 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 ACSF3Q4G176 576 aaPredicted RBP10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 CMTM1Q8IZ96 169 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 FAM185AQ8N0U4 392 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 OR14J1Q9UGF5 321 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 VDAC3Q9Y277 283 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 H3BML4 177 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 BCL2P10415 239 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 APLNRP35414 380 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 GFERP55789 205 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 NMSQ5H8A3 153 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 P2RX4Q99571 388 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 ATP5SQ99766 215 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 RNF115Q9Y4L5 304 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 FER1L5A0AVI2 2057 aa10.47□□□□□ -0.73
SMARCAL1-201ENST00000357276 LOC102725191A0A1B0GVB3 256 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 LILRA5A6NI73 299 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 SHISA8B8ZZ34 492 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 SFTPCP11686 197 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 OMGP23515 440 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 NPBWR2P48146 333 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 PAX9P55771 341 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 COL10A1Q03692 680 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 HNF4GQ14541 408 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 RNPS1Q15287 305 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 FOXL2NBQ6ZUU3 175 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 SELENOHQ8IZQ5 122 aaKnown RBP10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 MBD3L1Q8WWY6 194 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 ADGRG7Q96K78 797 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 MRGPRX4Q96LA9 322 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 LRRC61Q9BV99 259 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 METTL9Q9H1A3 318 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 VAX2Q9UIW0 290 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 IGKV1-27A0A075B6S5 117 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 DUXBA0A1W2PPF3 345 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 SSSCA1O60232 199 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 TK1P04183 234 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 DRD1P21728 446 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 AADACP22760 399 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 MTCP1P56278 107 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 FBXW4P57775 412 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 RNF4P78317 190 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 OR8B8Q15620 311 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 PLPPR5Q32ZL2 321 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 CXorf66Q5JRM2 361 aaPredicted RBP10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 TGIF2LYQ8IUE0 185 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 CABLES2Q9BTV7 478 aa10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 ELL3Q9HB65 397 aaPredicted RBP10.46□□□□□ -0.73
SMARCAL1-201ENST00000357276 GNRHRP30968 328 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 MRPS21P82921 87 aaKnown RBP10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 IL24Q13007 206 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 PMS2P11Q13670 270 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 ENDOGQ14249 297 aaKnown RBP10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 SPSB1Q96BD6 273 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 SPIN2AQ99865 258 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 SPIN2BQ9BPZ2 258 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 ZNF160Q9HCG1 818 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 SOHLH2Q9NX45 425 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 P4HTMQ9NXG6 502 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms