RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 TMEM204Q9BSN7 226 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 PKIBQ9C010 78 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 ALX4Q9H161 411 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 R4GMQ9 66 aa7.19□□□□□ -1.26
SCN8A-201ENST00000354534 RGPD8O14715 1765 aaPredicted RBP7.19□□□□□ -1.26
SCN8A-201ENST00000354534 CGB1A6NKQ9 187 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 M0R082 166 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 CYB5R3P00387 301 aaPredicted RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 IGHV4-39P01824 125 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 FPR2P25090 351 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 PITX1P78337 314 aaPredicted RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 SLC25A34Q6PIV7 304 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 FUNDC1Q8IVP5 155 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 FBXL17Q9UF56 701 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 POLEQ07864 2286 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 LEPROTL1O95214 131 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM255AQ5JRV8 349 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 OTPQ5XKR4 325 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 LIAT1Q6ZQX7 453 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 GPRIN1Q7Z2K8 1008 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 LSM10Q969L4 123 aaKnown RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 RASL11BQ9BPW5 248 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 GLIPR2Q9H4G4 154 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 SPCS1Q9Y6A9 102 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 RGPD1P0DJD0 1748 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 ZNF26P17031 533 aaPredicted RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 TNXAQ16473 311 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 SLC36A1Q7Z2H8 476 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 SAP30LQ9HAJ7 183 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 CDC42EP3Q9UKI2 254 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 TBX21Q9UL17 535 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 MRGPREQ86SM8 312 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 ST6GALNAC3Q8NDV1 305 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 OR2Y1Q8NGV0 311 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 PPIL1Q9Y3C6 166 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 ZPBPQ9BS86 351 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 CADP27708 2225 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 ABCA7Q8IZY2 2146 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 TRBV7-9A0A0J9YWB2 115 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 INHBBP09529 407 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 MDH2P40926 338 aaKnown RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 SUMO2P61956 95 aaKnown RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 CDC20Q12834 499 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 DHCR7Q9UBM7 475 aaKnown RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 ERRFI1Q9UJM3 462 aaPredicted RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 C19orf53Q9UNZ5 99 aaPredicted RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 RALGAPA1Q6GYQ0 2036 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 HSPB2A8KAH6 182 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 MFAP2P55001 183 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 HSPB2Q16082 182 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 OR2C3Q8N628 320 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 ZNF665Q9H7R5 613 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 MBNL1Q9NR56 388 aaKnown RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 COL1A1P02452 1464 aaPredicted RBP7.18□□□□□ -1.26
SCN8A-201ENST00000354534 PPP6CO00743 305 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 FCARP24071 287 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 CLEC18BQ6UXF7 455 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 FBXL14Q8N1E6 418 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 DNASE2BQ8WZ79 361 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 EDAQ92838 391 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 SMOC1Q9H4F8 434 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 TMEM160Q9NX00 188 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 H3BQ15 152 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 SLC25A20O43772 301 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 CDK2AP2O75956 126 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 OR3A4PP47883 348 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 NXPH1P58417 271 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 PLPPR5Q32ZL2 321 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 PARP11Q9NR21 331 aa7.18□□□□□ -1.26
SCN8A-201ENST00000354534 PRSS12P56730 875 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 FBXO46Q6PJ61 603 aaPredicted RBP7.17□□□□□ -1.26
SCN8A-201ENST00000354534 HIST1H1DP16402 221 aaKnown RBP7.17□□□□□ -1.26
SCN8A-201ENST00000354534 C10orf113Q5VZT2 155 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 ZDHHC22Q8N966 263 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 SSMEM1Q8WWF3 244 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 RGP1Q92546 391 aaPredicted RBP7.17□□□□□ -1.26
SCN8A-201ENST00000354534 PMCHL2Q9BQD1 86 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 MAP1LC3AQ9H492 121 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 CXorf36Q9H7Y0 433 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 UBE2ZQ9H832 354 aaPredicted RBP7.17□□□□□ -1.26
SCN8A-201ENST00000354534 NTMQ9P121 344 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 PROCRQ9UNN8 238 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 TSPAN2O60636 221 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 SS18L1O75177 396 aaPredicted RBP7.17□□□□□ -1.26
SCN8A-201ENST00000354534 GJB3O75712 270 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 GPX5O75715 221 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 FOLR2P14207 255 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 FUT6P51993 359 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 IL13RA2Q14627 380 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 HSD11B1LQ7Z5J1 315 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 SNED1Q8TER0 1413 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 SLC25A43Q8WUT9 341 aaPredicted RBP7.17□□□□□ -1.26
SCN8A-201ENST00000354534 FGF21Q9NSA1 209 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 TDRD6O60522 2096 aaKnown RBP7.17□□□□□ -1.26
SCN8A-201ENST00000354534 NWD2Q9ULI1 1742 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 OR8G5Q8NG78 346 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 OR5M9Q8NGP3 310 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 PIMREGQ9BSJ6 248 aa7.17□□□□□ -1.26
SCN8A-201ENST00000354534 TRBV23-1A0A0A0MS06 115 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms