RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 IGHV4-39P01824 125 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 CSTBP04080 98 aaKnown RBP6.98□□□□□ -1.29
CD44-205ENST00000352818 IFNA6P05013 189 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 GSTT2P0CG29 244 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 IGHV4-31P0DP07 118 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 HLA-GP17693 338 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 ZBTB25P24278 435 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 CHATP28329 748 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 OPRM1P35372 400 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 ECI1P42126 302 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 TGFBR3Q03167 851 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 FOXF2Q12947 444 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 ARFRP1Q13795 201 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 SURF2Q15527 256 aaPredicted RBP6.98□□□□□ -1.29
CD44-205ENST00000352818 MICBQ29980 383 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 CEACAM21Q3KPI0 293 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 Q5BKY6 102 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 C9orf135Q5VTT2 229 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 PLCXD3Q63HM9 321 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 ELP2Q6IA86 826 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 OR2A2Q6IF42 318 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 OR52W1Q6IF63 320 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 MOB3CQ70IA8 216 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 ZNF767PQ75MW2 155 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 RTN4RL2Q86UN3 420 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 LHFPL1Q86WI0 220 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 ZDHHC23Q8IYP9 409 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 MUC20Q8N307 709 aaPredicted RBP6.98□□□□□ -1.29
CD44-205ENST00000352818 OR4S1Q8NGB4 309 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 OR11H4Q8NGC9 324 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 OR5L1Q8NGL2 311 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 OR2T35Q8NGX2 323 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 OR10K1Q8NGX5 313 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 OR4K15Q8NH41 348 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 EMG1Q92979 244 aaKnown RBP6.98□□□□□ -1.29
CD44-205ENST00000352818 FBXW5Q969U6 566 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 MRGPRFQ96AM1 343 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 SCGB3A2Q96PL1 93 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 CA10Q9NS85 328 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 MGAT4AQ9UM21 535 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 VSIG4Q9Y279 399 aa6.98□□□□□ -1.29
CD44-205ENST00000352818 IGKV1-12A0A0C4DH73 117 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 F5H5P2 479 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 SMLR1H3BR10 107 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 PDCD6O75340 191 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 HTR3BO95264 441 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 IGKV1D-12P01611 117 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 CRHP06850 196 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 ZNF14P17017 642 aaPredicted RBP6.97□□□□□ -1.29
CD44-205ENST00000352818 AMY2BP19961 511 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 C4BPBP20851 252 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 IGHV1-2P23083 117 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 FPR2P25090 351 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 CCKARP32238 428 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 WNT5AP41221 380 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 RBM11P57052 281 aaKnown RBP6.97□□□□□ -1.29
CD44-205ENST00000352818 PRDX4Q13162 271 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 DHRS2Q13268 280 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 IKZF1Q13422 519 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 NKPD1Q17RQ9 610 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 TBC1D28Q2M2D7 210 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 SCGB2B2Q4G0G5 96 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 C4orf46Q504U0 113 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 HIKESHIQ53FT3 197 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 FBLN7Q53RD9 439 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 SIGIRRQ6IA17 410 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 FBXW12Q6X9E4 464 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 LYG2Q86SG7 212 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 PEG10Q86TG7 708 aaKnown RBP6.97□□□□□ -1.29
CD44-205ENST00000352818 TMEM17Q86X19 198 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 OSR2Q8N2R0 312 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 C17orf78Q8N4C9 275 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 C12orf45Q8N5I9 185 aaPredicted RBP6.97□□□□□ -1.29
CD44-205ENST00000352818 SLC30A7Q8NEW0 376 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 TMEM185AQ8NFB2 350 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 OR5A2Q8NGI9 324 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 OR52B4Q8NGK2 314 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 OR5H2Q8NGV7 314 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 TERB2Q8NHR7 220 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 HPSE2Q8WWQ2 592 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 PIGCQ92535 297 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 C12orf49Q9H741 205 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 ELL3Q9HB65 397 aaPredicted RBP6.97□□□□□ -1.29
CD44-205ENST00000352818 RHOFQ9HBH0 211 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 OBP2BQ9NPH6 170 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 OPN4Q9UHM6 478 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 NOP16Q9Y3C1 178 aaKnown RBP6.97□□□□□ -1.29
CD44-205ENST00000352818 BOLA1Q9Y3E2 137 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 HSPB11Q9Y547 144 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 MPC1Q9Y5U8 109 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 MED12LQ86YW9 2145 aa6.97□□□□□ -1.29
CD44-205ENST00000352818 A0A0B4J2A0 478 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 MBD3L3A6NE82 208 aaPredicted RBP6.96□□□□□ -1.3
CD44-205ENST00000352818 OR5B21A6NL26 309 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 OR2AT4A6NND4 320 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 CD300LBA8K4G0 201 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 ZNF850A8MQ14 1090 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 HMSDA8MTL9 139 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 GOSR2O14653 212 aa6.96□□□□□ -1.3
CD44-205ENST00000352818 CD8AP01732 235 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms