RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 MEX3BQ6ZN04 569 aaKnown RBP18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 PAPOLGQ9BWT3 736 aaKnown RBP18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 CACFD1Q9UGQ2 172 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 LHX6Q9UPM6 363 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 SHANK1Q9Y566 2161 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 CDS2O95674 445 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 SP9P0CG40 484 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 CAMLGP49069 296 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 HOXA1P49639 335 aaPredicted RBP18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 ARF1P84077 181 aaKnown RBP18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 SRSF7Q16629 238 aaKnown RBP eCLIP18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 DPPA2Q7Z7J5 298 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 OR56B2PQ8NGI1 322 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 SECTM1Q8WVN6 248 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 REPIN1Q9BWE0 567 aaKnown RBP18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 SMCO4Q9NRQ5 59 aa18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 STRAPQ9Y3F4 350 aaKnown RBP18.93■□□□□ 0.62
NKX2-4-201ENST00000351817 NME2P1O60361 137 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 CRYBA1P05813 215 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 ZNF616Q08AN1 781 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 TIPARPQ7Z3E1 657 aaKnown RBP18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 SAXO1Q8IYX7 474 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 BATF2Q8N1L9 274 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 PSMF1Q92530 271 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 TMEM222Q9H0R3 208 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 BIN3Q9NQY0 253 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 LOXL2Q9Y4K0 774 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 MEX3AA1L020 520 aaKnown RBP18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 TRDCB7Z8K6 153 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 PRSS44E7EML9 344 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 F10P00742 488 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 ZNF883P0CG24 379 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 BCL3P20749 454 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 PPT1P50897 306 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 NHLH2Q02577 135 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 PRDX4Q13162 271 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 HPSE2Q8WWQ2 592 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 SLC7A10Q9NS82 523 aa18.92■□□□□ 0.62
NKX2-4-201ENST00000351817 GUK1Q16774 197 aa18.91■□□□□ 0.62
NKX2-4-201ENST00000351817 C19orf12Q9NSK7 152 aa18.91■□□□□ 0.62
NKX2-4-201ENST00000351817 LRFN1Q9P244 771 aa18.91■□□□□ 0.62
NKX2-4-201ENST00000351817 GNRHRP30968 328 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 FGF12P61328 243 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 SLAMF9Q96A28 289 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 Q9N2K0 584 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 PCSK5Q92824 1860 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 COLCA2A8K830 154 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 PAX6P26367 422 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 RND3P61587 244 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 SPINK14Q6IE38 97 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 BOD1Q96IK1 185 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 TMEM56Q96MV1 263 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 SCRT1Q9BWW7 348 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 UBE2J1Q9Y385 318 aaPredicted RBP18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 TMEM56-RWDD3S4R434 201 aa18.9■□□□□ 0.62
NKX2-4-201ENST00000351817 NKX2-6A6NCS4 301 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 PRH1P02810 166 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 TK1P04183 234 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 CCNOP22674 350 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 HAAOP46952 286 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 KCNJ3P48549 501 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 EWSR1Q01844 656 aaKnown RBP eCLIP18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 KDF1Q8NAX2 398 aaPredicted RBP18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 THOC3Q96J01 351 aaKnown RBP18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 SPIN2AQ99865 258 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 SPIN2BQ9BPZ2 258 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 FAM173AQ9BQD7 235 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 C11orf1Q9H5F2 150 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 DOCK10Q96BY6 2186 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 LNP1A1A4G5 178 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 NAPSAO96009 420 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 COX5BP10606 129 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 NOVA1P51513 510 aaKnown RBP18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 MRPL21Q7Z2W9 205 aaKnown RBP18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 TBC1D26Q86UD7 250 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 ZNF695Q8IW36 515 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 ZDHHC23Q8IYP9 409 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 OR2C3Q8N628 320 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 C15orf54Q8N8G6 183 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 ZNF565Q8N9K5 539 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 HSD17B11Q8NBQ5 300 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 ZPBPQ9BS86 351 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 SH3BGRL3Q9H299 93 aa18.89■□□□□ 0.61
NKX2-4-201ENST00000351817 A0A096LPE4 126 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 A0A1W2PPZ6 126 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 LHX2P50458 406 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 SRYQ05066 204 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 CEACAM21Q3KPI0 293 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 OR2M7Q8NG81 312 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 USB1Q9BQ65 265 aaKnown RBP18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 FGF23Q9GZV9 251 aaPredicted RBP18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 RNF122Q9H9V4 155 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 C5orf49A4QMS7 147 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 FOLR2P14207 255 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 NKX2-1P43699 371 aaPredicted RBP18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 FHITP49789 147 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 GPM6AP51674 278 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 AKR1D1P51857 326 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 MPV17LQ2QL34 196 aa18.88■□□□□ 0.61
NKX2-4-201ENST00000351817 SPIN3Q5JUX0 258 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms