RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 RPUSD4Q96CM3 377 aaKnown RBP13.33□□□□□ -0.28
LMNA-201ENST00000347559 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 OR5B12Q96R08 314 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 SMIM7Q9BQ49 75 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 POLR3KQ9Y2Y1 108 aaPredicted RBP13.33□□□□□ -0.28
LMNA-201ENST00000347559 ZNF732B4DXR9 585 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 TMEM50AO95807 157 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 CD33P20138 364 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 GALR1P47211 349 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 DCAF10Q5QP82 559 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 ZNF774Q6NX45 483 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 ADIPOR1Q96A54 375 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 VSIRQ9H7M9 311 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 MOB1AQ9H8S9 216 aa13.33□□□□□ -0.28
LMNA-201ENST00000347559 LYRM2Q9NU23 88 aaPredicted RBP13.33□□□□□ -0.28
LMNA-201ENST00000347559 KIAA2026Q5HYC2 2103 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 MUC22E2RYF6 1773 aaPredicted RBP13.32□□□□□ -0.28
LMNA-201ENST00000347559 CCDC85CA6NKD9 419 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 METTL15P1P0C7V9 234 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 DCAF7P61962 342 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 TFF2Q03403 129 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 RUNX3Q13761 415 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 LRTM2Q8N967 370 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.32□□□□□ -0.28
LMNA-201ENST00000347559 DIRC2Q96SL1 478 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 TWSG1Q9GZX9 223 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 DECR2Q9NUI1 292 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 P4HTMQ9NXG6 502 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 C3orf85A0A1B0GTC6 90 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 H7BYZ3 331 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 GALNSP34059 522 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 CRIP3Q6Q6R5 217 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 NAT6Q93015 286 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 WWTR1Q9GZV5 400 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 CHST11Q9NPF2 352 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 RPRMQ9NS64 109 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 SOHLH2Q9NX45 425 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 TBX21Q9UL17 535 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 PIGLQ9Y2B2 252 aa13.32□□□□□ -0.28
LMNA-201ENST00000347559 A0A1B0GUS0 222 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 TMEM150CB9EJG8 249 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 APODP05090 189 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 IRF2P14316 349 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 HHEXQ03014 270 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 CST9LP1Q5W188 147 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 ZNF100Q8IYN0 542 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 BATF2Q8N1L9 274 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 PLA2G3Q9NZ20 509 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 CHST1O43916 411 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 AADACP22760 399 aa13.31□□□□□ -0.28
LMNA-201ENST00000347559 THAP3Q8WTV1 239 aaPredicted RBP13.31□□□□□ -0.28
LMNA-201ENST00000347559 RIMS4Q9H426 269 aaPredicted RBP13.31□□□□□ -0.28
LMNA-201ENST00000347559 PFN1P07737 140 aaKnown RBP13.3□□□□□ -0.28
LMNA-201ENST00000347559 FOSL2P15408 326 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 TM4SF4P48230 202 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 MTCP1P56278 107 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 TAS2R30P59541 319 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 TMEM267Q0VDI3 215 aaPredicted RBP13.3□□□□□ -0.28
LMNA-201ENST00000347559 C1orf194Q5T5A4 169 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 DTX1Q86Y01 620 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 C9orf40Q8IXQ3 194 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 ARL6IP6Q8N6S5 226 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 CCDC71LQ8N9Z2 235 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 SDSLQ96GA7 329 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 LYZL4Q96KX0 146 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 CTDSP1Q9GZU7 261 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 SERINC1Q9NRX5 453 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 CPAMD8Q8IZJ3 1885 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 ARHGAP21Q5T5U3 1957 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 GNRH1P01148 92 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 IFNA5P01569 189 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 GNRHRP30968 328 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 SSC4DQ8WTU2 575 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 TBX15Q96SF7 602 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 TM2D1Q9BX74 207 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 CERS4Q9HA82 394 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 ZNF160Q9HCG1 818 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 CISD1Q9NZ45 108 aaKnown RBP13.3□□□□□ -0.28
LMNA-201ENST00000347559 PRSS50Q9UI38 385 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 TRDCB7Z8K6 153 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 HMGB3O15347 200 aaKnown RBP13.3□□□□□ -0.28
LMNA-201ENST00000347559 TOX3O15405 576 aaPredicted RBP13.3□□□□□ -0.28
LMNA-201ENST00000347559 TCF21O43680 179 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 OR2J2O76002 312 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 HNRNPA1P09651 372 aaKnown RBP eCLIP13.3□□□□□ -0.28
LMNA-201ENST00000347559 SELEP16581 610 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 PLA2G5P39877 138 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 ZNF133P52736 654 aaPredicted RBP13.3□□□□□ -0.28
LMNA-201ENST00000347559 HNRNPKP61978 463 aaKnown RBP eCLIP13.3□□□□□ -0.285e-6■■□□□ 11.6
LMNA-201ENST00000347559 TRA2AQ13595 282 aaKnown RBP eCLIP13.3□□□□□ -0.28
LMNA-201ENST00000347559 OR5I1Q13606 314 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 ODF3L1Q8IXM7 274 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 PRR18Q8N4B5 295 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 NAGKQ9UJ70 344 aa13.3□□□□□ -0.28
LMNA-201ENST00000347559 B4DGG1 531 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 CDS2O95674 445 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 TFPI2P48307 235 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 DNASE2BQ8WZ79 361 aa13.29□□□□□ -0.28
LMNA-201ENST00000347559 IL22RA2Q969J5 263 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms