RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 BPIFCQ8NFQ6 507 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 PLPPR2Q96GM1 343 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 TMUB1Q9BVT8 246 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 CNTD2Q9H8S5 307 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 SPRY1O43609 319 aaPredicted RBP9.56□□□□□ -0.88
CLCN6-202ENST00000346436 ZP3P21754 424 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 ZNF774Q6NX45 483 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 ATG4DQ86TL0 474 aaPredicted RBP9.56□□□□□ -0.88
CLCN6-202ENST00000346436 OR10Z1Q8NGY1 313 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 MCHR2Q969V1 340 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 STRAPQ9Y3F4 350 aaKnown RBP9.56□□□□□ -0.88
CLCN6-202ENST00000346436 B9A039 149 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 BCL2L11O43521 198 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 CHATP28329 748 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 SPACA3Q8IXA5 215 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 ARHGEF39Q8N4T4 335 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 CHRDL1Q9BU40 450 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 J3QKU1 62 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 GSTZ1O43708 216 aaPredicted RBP9.56□□□□□ -0.88
CLCN6-202ENST00000346436 SPP1P10451 314 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 ADRA2CP18825 462 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 LAMTOR1Q6IAA8 161 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 OR8G2PQ6IF36 304 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 DEGS2Q6QHC5 323 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 C20orf196Q8IYI0 205 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 LSMEM1Q8N8F7 131 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 TMPRSS13Q9BYE2 586 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 INSIG2Q9Y5U4 225 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 URGCP-MRPS24S4R325 110 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 SPTA1P02549 2419 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 METTL15P1P0C7V9 234 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 RAG2P55895 527 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 SLC37A1P57057 533 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 AVPI1Q5T686 147 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 ADAM5Q6NVV9 412 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 RBPMS2Q6ZRY4 209 aaKnown RBP9.56□□□□□ -0.88
CLCN6-202ENST00000346436 OR2W3Q7Z3T1 314 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 TGIF2LYQ8IUE0 185 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 TGIF2LXQ8IUE1 241 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 FAM212BQ9NTI7 297 aaPredicted RBP9.56□□□□□ -0.88
CLCN6-202ENST00000346436 ZDHHC8Q9ULC8 765 aa9.56□□□□□ -0.88
CLCN6-202ENST00000346436 OR4C45A6NMZ5 311 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 TESK1Q15569 626 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 AMELYQ99218 206 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 TRAF4Q9BUZ4 470 aaPredicted RBP9.55□□□□□ -0.88
CLCN6-202ENST00000346436 METRNQ9UJH8 293 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 RRASP10301 218 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 CXCL2P19875 107 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 NKX2-1P43699 371 aaPredicted RBP9.55□□□□□ -0.88
CLCN6-202ENST00000346436 SP6Q3SY56 376 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 OR2B11Q5JQS5 317 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 FAM122BQ7Z309 247 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 BAP18Q8IXM2 172 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 NEU4Q8WWR8 484 aaPredicted RBP9.55□□□□□ -0.88
CLCN6-202ENST00000346436 MS4A3Q96HJ5 214 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 ARHGAP5-AS1Q96IT6 56 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 TDRD6O60522 2096 aaKnown RBP9.55□□□□□ -0.88
CLCN6-202ENST00000346436 CABIN1Q9Y6J0 2220 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 SULT1C2O00338 296 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 DSCR9P59020 149 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 TMEM182Q6ZP80 229 aaPredicted RBP9.55□□□□□ -0.88
CLCN6-202ENST00000346436 GPR137Q96N19 417 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 C7orf66A4D0T2 115 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 K7ESF4 209 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 DUSP1P28562 367 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 FCGR2CP31995 323 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 MRPS34P82930 218 aaKnown RBP9.55□□□□□ -0.88
CLCN6-202ENST00000346436 PMP22Q01453 160 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 NR2C2APQ86WQ0 139 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 TERB2Q8NHR7 220 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 OPN3Q9H1Y3 402 aaPredicted RBP9.55□□□□□ -0.88
CLCN6-202ENST00000346436 GNG13Q9P2W3 67 aa9.55□□□□□ -0.88
CLCN6-202ENST00000346436 DHRS3O75911 302 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 ZNF205O95201 554 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 HLA-DQB1P01920 261 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 VSIG10L2P0DP72 767 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 GUCA2BQ16661 112 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 ELF5Q9UKW6 265 aaPredicted RBP9.54□□□□□ -0.88
CLCN6-202ENST00000346436 FOXS1O43638 330 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 PERPQ96FX8 193 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 PFDN5Q99471 154 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 SUCNR1Q9BXA5 334 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 OPN4Q9UHM6 478 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 PILRAQ9UKJ1 303 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 PIN1P1O15428 100 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 ADAP1O75689 374 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 GZMHP20718 246 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 FCARP24071 287 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 GABRA6Q16445 453 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 CLEC9AQ6UXN8 241 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 FAM168AQ92567 244 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 ZNF716A6NP11 495 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 SERPINE3A8MV23 424 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 PLPP3O14495 311 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 CTDSPLO15194 276 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 MGST1P10620 155 aaKnown RBP9.54□□□□□ -0.88
CLCN6-202ENST00000346436 LSM6P62312 80 aaKnown RBP9.54□□□□□ -0.88
CLCN6-202ENST00000346436 OR2M3Q8NG83 312 aa9.54□□□□□ -0.88
CLCN6-202ENST00000346436 ZNF519Q8TB69 540 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms