RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 SSSCA1O60232 199 aa18.59■□□□□ 0.57
TRIM3-201ENST00000345851 COX5BP10606 129 aa18.59■□□□□ 0.57
TRIM3-201ENST00000345851 EPHA1P21709 976 aa18.59■□□□□ 0.57
TRIM3-201ENST00000345851 DTX1Q86Y01 620 aa18.59■□□□□ 0.57
TRIM3-201ENST00000345851 DNASE2BQ8WZ79 361 aa18.59■□□□□ 0.57
TRIM3-201ENST00000345851 SERINC1Q9NRX5 453 aa18.59■□□□□ 0.57
TRIM3-201ENST00000345851 GNG13Q9P2W3 67 aa18.59■□□□□ 0.57
TRIM3-201ENST00000345851 PITPNC1Q9UKF7 332 aa18.59■□□□□ 0.57
TRIM3-201ENST00000345851 NKX2-6A6NCS4 301 aa18.58■□□□□ 0.57
TRIM3-201ENST00000345851 SOX15O60248 233 aa18.58■□□□□ 0.57
TRIM3-201ENST00000345851 EFNA3P52797 238 aa18.58■□□□□ 0.57
TRIM3-201ENST00000345851 PPA1Q15181 289 aa18.58■□□□□ 0.57
TRIM3-201ENST00000345851 C21orf62-AS1Q17RA5 79 aa18.58■□□□□ 0.57
TRIM3-201ENST00000345851 OR1L3Q8NH93 324 aa18.58■□□□□ 0.57
TRIM3-201ENST00000345851 MAFAQ8NHW3 353 aaPredicted RBP18.58■□□□□ 0.57
TRIM3-201ENST00000345851 PGAM5Q96HS1 289 aa18.58■□□□□ 0.57
TRIM3-201ENST00000345851 NR2C1P13056 603 aa18.58■□□□□ 0.56
TRIM3-201ENST00000345851 SHBQ15464 509 aa18.58■□□□□ 0.56
TRIM3-201ENST00000345851 WWTR1Q9GZV5 400 aa18.58■□□□□ 0.56
TRIM3-201ENST00000345851 CALHM2Q9HA72 323 aa18.58■□□□□ 0.56
TRIM3-201ENST00000345851 DECR2Q9NUI1 292 aa18.58■□□□□ 0.56
TRIM3-201ENST00000345851 NECAP2Q9NVZ3 263 aa18.58■□□□□ 0.56
TRIM3-201ENST00000345851 CLDN34H7C241 214 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 HSPA12AO43301 675 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 MMP9P14780 707 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 ZP4Q12836 540 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 CMTM1Q8IZ96 169 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 CABLES2Q9BTV7 478 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 GLRX2Q9NS18 164 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 ZFP92A6NM28 416 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 LYZL4Q96KX0 146 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 TP53RKQ96S44 253 aa18.57■□□□□ 0.56
TRIM3-201ENST00000345851 A0A1B0GWJ7 208 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 F5H5K5 113 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 GALNSP34059 522 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 DYNLT3P51808 116 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 TMEM183AQ8IXX5 376 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 OR4D5Q8NGN0 318 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 OR4X1Q8NH49 305 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 THAP3Q8WTV1 239 aaPredicted RBP18.56■□□□□ 0.56
TRIM3-201ENST00000345851 IL18BPO95998 194 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 RAB4BP61018 213 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 THOC3Q96J01 351 aaKnown RBP18.56■□□□□ 0.56
TRIM3-201ENST00000345851 PNLIPP16233 465 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 TMEM234Q8WY98 164 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 TM2D1Q9BX74 207 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 GAB2Q9UQC2 676 aa18.56■□□□□ 0.56
TRIM3-201ENST00000345851 GPR179Q6PRD1 2367 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 DVL1O14640 695 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 PITX3O75364 302 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 TUBG1P23258 451 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 NKX2-1P43699 371 aaPredicted RBP18.55■□□□□ 0.56
TRIM3-201ENST00000345851 NSDHLQ15738 373 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 MPV17LQ2QL34 196 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 WDR25Q64LD2 544 aaPredicted RBP18.55■□□□□ 0.56
TRIM3-201ENST00000345851 TMEM252Q8N6L7 170 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 NOL4LQ96MY1 436 aaPredicted RBP18.55■□□□□ 0.56
TRIM3-201ENST00000345851 SPRY1O43609 319 aaPredicted RBP18.55■□□□□ 0.56
TRIM3-201ENST00000345851 PRSS12P56730 875 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 TNFRSF9Q07011 255 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 ARL6IP1Q15041 203 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 CXorf66Q5JRM2 361 aaPredicted RBP18.55■□□□□ 0.56
TRIM3-201ENST00000345851 RAB24Q969Q5 203 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 GPHA2Q96T91 129 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 PNRC2Q9NPJ4 139 aaKnown RBP18.55■□□□□ 0.56
TRIM3-201ENST00000345851 B3GAT1Q9P2W7 334 aa18.55■□□□□ 0.56
TRIM3-201ENST00000345851 PROB1E7EW31 1015 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 CD55P08174 381 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 ALDH3B1P43353 468 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 FOXF1Q12946 379 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 SLC10A1Q14973 349 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 FAM90A2PQ658T7 463 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 LANCL3Q6ZV70 420 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 LRTM2Q8N967 370 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 NECAP1Q8NC96 275 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 OR8G5Q8NG78 346 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 MRPL13Q9BYD1 178 aaKnown RBP18.54■□□□□ 0.56
TRIM3-201ENST00000345851 PCED1AQ9H1Q7 454 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 DUX1O43812 170 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 PGA3P0DJD8 388 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 FBXW4P57775 412 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 VAMP2P63027 116 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 RNF4P78317 190 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 COL10A1Q03692 680 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 CLEC12BQ2HXU8 276 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 THEM4Q5T1C6 240 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 GUSBP11Q6P575 273 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 FAM180AQ6UWF9 173 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 RCC1LQ96I51 464 aaKnown RBP18.54■□□□□ 0.56
TRIM3-201ENST00000345851 PIGLQ9Y2B2 252 aa18.54■□□□□ 0.56
TRIM3-201ENST00000345851 A0A1B0GU03 582 aa18.53■□□□□ 0.56
TRIM3-201ENST00000345851 MMP7P09237 267 aaPredicted RBP18.53■□□□□ 0.56
TRIM3-201ENST00000345851 GLB1P16278 677 aa18.53■□□□□ 0.56
TRIM3-201ENST00000345851 CCL1P22362 96 aa18.53■□□□□ 0.56
TRIM3-201ENST00000345851 LYSMD4Q5XG99 296 aa18.53■□□□□ 0.56
TRIM3-201ENST00000345851 COPS7AQ9UBW8 275 aa18.53■□□□□ 0.56
TRIM3-201ENST00000345851 TCFL5Q9UL49 500 aa18.53■□□□□ 0.56
TRIM3-201ENST00000345851 PATE3B3GLJ2 98 aa18.53■□□□□ 0.56
TRIM3-201ENST00000345851 CYB5R3P00387 301 aaPredicted RBP18.53■□□□□ 0.56
TRIM3-201ENST00000345851 H3F3AP84243 136 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms