RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SELENOIQ9C0D9 397 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 MMP26Q9NRE1 261 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 INSIG2Q9Y5U4 225 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 AUP1Q9Y679 476 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 ARHGAP32A7KAX9 2087 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 ABCA2Q9BZC7 2435 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 A0A0G2JK05 382 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A10PA6NDY2 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A18PA6NE21 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A16PA6NEW6 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A20PA6NIJ5 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A8PA6NJQ4 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A7PA6NKC0 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 NOTOA8MTQ0 251 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A22PA8MWA6 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A12PA8MX19 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A5PA8MXJ8 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A23PA8MXZ1 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 SIRPB1O00241 398 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 TMEM127O75204 238 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 ZNF737O75373 536 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A15PP0C7V4 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A13PP0C7W8 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A14PP0C7W9 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM90A24PP0C7X0 464 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 SMIM18P0DKX4 95 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 MGMTP16455 207 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 CEBPDP49716 269 aaPredicted RBP9.8□□□□□ -0.84
SNCA-202ENST00000345009 PAX8Q06710 450 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 RBM39Q14498 530 aaKnown RBP9.8□□□□□ -0.84
SNCA-202ENST00000345009 CHRFAM7AQ494W8 412 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 PAN3Q58A45 887 aaKnown RBP9.8□□□□□ -0.84
SNCA-202ENST00000345009 FAM120AOSQ5T036 256 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 OR2W3Q7Z3T1 314 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 OR13F1Q8NGS4 319 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 C8orf46Q8TAG6 207 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 NANPQ8TBE9 248 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 NKX3-1Q99801 234 aaPredicted RBP9.8□□□□□ -0.84
SNCA-202ENST00000345009 URM1Q9BTM9 101 aaKnown RBP9.8□□□□□ -0.84
SNCA-202ENST00000345009 FUNDC2Q9BWH2 189 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 IFT22Q9H7X7 185 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 STEAP1Q9UHE8 339 aa9.8□□□□□ -0.84
SNCA-202ENST00000345009 A0A1B0GW55 424 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 hADV38S2A0JD32 116 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 IFITM5A6NNB3 132 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 C22orf46C9J442 243 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 AIPO00170 330 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 GEMIN2O14893 280 aaKnown RBP9.79□□□□□ -0.84
SNCA-202ENST00000345009 MPIG6BO95866 241 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 TFF1P04155 84 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 DUX4L2P0CJ85 424 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 DUX4L3P0CJ86 424 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 DUX4L4P0CJ87 422 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 DUX4L5P0CJ88 424 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 DUX4L6P0CJ89 424 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 DUX4L7P0CJ90 424 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 SELLP14151 372 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 ERP29P30040 261 aaKnown RBP9.79□□□□□ -0.84
SNCA-202ENST00000345009 SDC2P34741 201 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 RPL5P46777 297 aaKnown RBP9.79□□□□□ -0.84
SNCA-202ENST00000345009 EDDM3BP56851 147 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 MEF2CQ06413 473 aaPredicted RBP9.79□□□□□ -0.84
SNCA-202ENST00000345009 P2RY14Q15391 338 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 TAF9Q16594 264 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 PIGYQ3MUY2 71 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 ATAD3CQ5T2N8 411 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 Q6P435 159 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 DUX4L9Q6RFH8 374 aaPredicted RBP9.79□□□□□ -0.84
SNCA-202ENST00000345009 C1orf122Q6ZSJ8 110 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 FAM185AQ8N0U4 392 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 LY6G5BQ8NDX9 201 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 FAM3DQ96BQ1 224 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 CENPOQ9BU64 300 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 TMEM59Q9BXS4 323 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 BANF2Q9H503 90 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 ONECUT1Q9UBC0 465 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 IL36RNQ9UBH0 155 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 DUX4Q9UBX2 424 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 KPTNQ9Y664 436 aa9.79□□□□□ -0.84
SNCA-202ENST00000345009 JMJD1CQ15652 2540 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 MCRIP1C9JLW8 97 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 INAFM1C9JVW0 142 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 SLC33A1O00400 549 aaPredicted RBP9.78□□□□□ -0.84
SNCA-202ENST00000345009 PSPNO60542 156 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 TOX4O94842 621 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 CSN2P05814 226 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 GLAP06280 429 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 FUT3P21217 361 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 CFPP27918 469 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 PAX2Q02962 417 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 EDDM3AQ14507 147 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 C2orf76Q3KRA6 126 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 HES5Q5TA89 166 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 C17orf107Q6ZR85 190 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 LURAP1LQ8IV03 231 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 KIR3DL3Q8N743 410 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 ZNF565Q8N9K5 539 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 TMEM104Q8NE00 496 aa9.78□□□□□ -0.84
SNCA-202ENST00000345009 OR4S1Q8NGB4 309 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms