RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 OR2H2O95918 312 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 IGKV1D-33P01593 117 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 IGKV1-33P01594 117 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 IGHG4P01861 327 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 PRKACAP17612 351 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 ATP6V1B2P21281 511 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 FAM27D1Q5T7N8 215 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 C16orf89Q6UX73 402 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 CYP2R1Q6VVX0 501 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 HDXQ7Z353 690 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 PGAM4Q8N0Y7 254 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 OR8H3Q8N146 312 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 OR11H1Q8NG94 326 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 RNFT2Q96EX2 444 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 COQ2Q96H96 371 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 HRASLS5Q96KN8 279 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 CCDC134Q9H6E4 229 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 MAGIXQ9H6Y5 334 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 HMG20AQ9NP66 347 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 SNX5Q9Y5X3 404 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 SH2D1BO14796 132 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 CSN2P05814 226 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 NFYBP25208 207 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 RAB7AP51149 207 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 SNU13P55769 128 aaKnown RBP13.14□□□□□ -0.31
TRA2B-202ENST00000342294 MADCAM1Q13477 382 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 ZNF322Q6U7Q0 402 aaPredicted RBP13.14□□□□□ -0.31
TRA2B-202ENST00000342294 PLEKHG7Q6ZR37 379 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 ZNF429Q86V71 674 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 Q8N6K4 173 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 MYOZ3Q8TDC0 251 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 GIPC3Q8TF64 312 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 BORCS8Q96FH0 119 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 CHST5Q9GZS9 411 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
TRA2B-202ENST00000342294 LIN7CQ9NUP9 197 aaKnown RBP13.14□□□□□ -0.31
TRA2B-202ENST00000342294 ACTR3BQ9P1U1 418 aa13.14□□□□□ -0.31
TRA2B-202ENST00000342294 KBTBD11-OT1A0A1B0GTJ5 212 aa13.13□□□□□ -0.31
TRA2B-202ENST00000342294 GATBO75879 557 aaKnown RBP13.13□□□□□ -0.31
TRA2B-202ENST00000342294 SPNP16150 400 aa13.13□□□□□ -0.31
TRA2B-202ENST00000342294 PSMB8P28062 276 aa13.13□□□□□ -0.31
TRA2B-202ENST00000342294 SPATS1Q496A3 300 aa13.13□□□□□ -0.31
TRA2B-202ENST00000342294 Q8N9W7 124 aa13.13□□□□□ -0.31
TRA2B-202ENST00000342294 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
TRA2B-202ENST00000342294 MRM2Q9UI43 246 aaKnown RBP13.13□□□□□ -0.31
TRA2B-202ENST00000342294 PSG11Q9UQ72 335 aa13.13□□□□□ -0.31
TRA2B-202ENST00000342294 TRIM64CA6NLI5 447 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 I3L521 148 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 IGHV3-7P01780 117 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 OR8U8P0C7N1 319 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 GP9P14770 177 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 CXCR4P61073 352 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 RUNX1Q01196 453 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 KIAA0141Q14154 515 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-202ENST00000342294 GK3PQ14409 553 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 FAM71E2Q8N5Q1 922 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 LEAP2Q969E1 77 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 EAF1Q96JC9 268 aaPredicted RBP13.12□□□□□ -0.31
TRA2B-202ENST00000342294 COMMD4Q9H0A8 199 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 LINC00574Q9H8X3 128 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 PLEKHA1Q9HB21 404 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 ISYNA1Q9NPH2 558 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 PLSCR3Q9NRY6 295 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 GSTK1Q9Y2Q3 226 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 HYDINQ4G0P3 5121 aa13.12□□□□□ -0.31
TRA2B-202ENST00000342294 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 IGKV1-12A0A0C4DH73 117 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 LDLRAD4O15165 306 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 IGKV1D-12P01611 117 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 OSMP13725 252 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 POU3F4P49335 361 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 RBP2P50120 134 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 ATP1B3P54709 279 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 ACTR3P61158 418 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 KRBOX4Q5JUW0 171 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 TMEM236Q5W0B7 351 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 Q6P435 159 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 OR1N2Q8NGR9 330 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 HAVCR2Q8TDQ0 301 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 CNN2Q99439 309 aaKnown RBP13.11□□□□□ -0.31
TRA2B-202ENST00000342294 PPIL3Q9H2H8 161 aaKnown RBP13.11□□□□□ -0.31
TRA2B-202ENST00000342294 SLC25A19Q9HC21 320 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 OR6C3Q9NZP0 311 aa13.11□□□□□ -0.31
TRA2B-202ENST00000342294 NCBP2LA6PVI3 153 aaKnown RBP13.1□□□□□ -0.31
TRA2B-202ENST00000342294 H3BSH0 61 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 SYT7O43581 403 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 RRP9O43818 475 aaKnown RBP13.1□□□□□ -0.31
TRA2B-202ENST00000342294 JTBO76095 146 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 CYB5AP00167 134 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 ZNF616Q08AN1 781 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 ZNF816Q0VGE8 651 aaPredicted RBP13.1□□□□□ -0.31
TRA2B-202ENST00000342294 PDZK1IP1Q13113 114 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 ODF4Q2M2E3 257 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 TMEM179BQ7Z7N9 219 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 CATSPERDQ86XM0 798 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 IZUMO1Q8IYV9 350 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 DCUN1D4Q92564 292 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 UBE2E2Q96LR5 201 aa13.1□□□□□ -0.31
TRA2B-202ENST00000342294 OSBPL10Q9BXB5 764 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms