RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TNFSF18Q9UNG2 199 aa11.31□□□□□ -0.6
COL18A1-201ENST00000342220 KIAA2026Q5HYC2 2103 aa11.31□□□□□ -0.6
COL18A1-201ENST00000342220 hCG_1809904A0A1W2PP81 198 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 A0A1W2PR64 198 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 A0A1W2PRV1 198 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 AP4M1O00189 453 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 HEXAP06865 529 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 FOLR2P14207 255 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 ACKR3P25106 362 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 FABP6P51161 128 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 UNC119Q13432 240 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 PNLDC1Q8NA58 520 aaKnown RBP11.3□□□□□ -0.6
COL18A1-201ENST00000342220 DTD1Q8TEA8 209 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 CASTOR1Q8WTX7 329 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 MYOZ1Q9NP98 299 aaPredicted RBP11.3□□□□□ -0.6
COL18A1-201ENST00000342220 DUSP13Q9UII6 198 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 PMP2P02689 132 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 ISG15P05161 165 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 ZBTB25P24278 435 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 F2RL1P55085 397 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 ERVS71-1P61550 626 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 C1QL2Q7Z5L3 287 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 OR51T1Q8NGJ9 327 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 BORCS8Q96FH0 119 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 ZNF701Q9NV72 531 aaPredicted RBP11.3□□□□□ -0.6
COL18A1-201ENST00000342220 CARHSP1Q9Y2V2 147 aaKnown RBP11.3□□□□□ -0.6
COL18A1-201ENST00000342220 RNF222A6NCQ9 220 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 RAB4BP61018 213 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 LSM6P62312 80 aaKnown RBP11.3□□□□□ -0.6
COL18A1-201ENST00000342220 RTP5Q14D33 572 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 ABLIM2Q6H8Q1 611 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 MDP1Q86V88 176 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 ZNF610Q8N9Z0 462 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 SEMA6DQ8NFY4 1073 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 OR56B2PQ8NGI1 322 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 ST6GALNAC5Q9BVH7 336 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 RPS10P5Q9NQ39 176 aa11.3□□□□□ -0.6
COL18A1-201ENST00000342220 A0A0A6YYH2 397 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 A6NJ64 397 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 RAB5CP51148 216 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 PCBD1P61457 104 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 TAF9Q16594 264 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 GFRALQ6UXV0 394 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 KCTD9Q7L273 389 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 LYG2Q86SG7 212 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 SLC25A42Q86VD7 318 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 ADAD2Q8NCV1 583 aaKnown RBP11.29□□□□□ -0.6
COL18A1-201ENST00000342220 RNF122Q9H9V4 155 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 PNRC2Q9NPJ4 139 aaKnown RBP11.29□□□□□ -0.6
COL18A1-201ENST00000342220 RAB22AQ9UL26 194 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 STARD10Q9Y365 291 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 BCL2L11O43521 198 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 VAMP1P23763 118 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 HRH1P35367 487 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 GNG10P50151 68 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 IL13RA1P78552 427 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 MEF2DQ14814 521 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 RNPS1Q15287 305 aaKnown RBP11.29□□□□□ -0.6
COL18A1-201ENST00000342220 SURF2Q15527 256 aaPredicted RBP11.29□□□□□ -0.6
COL18A1-201ENST00000342220 DOK3Q7L591 496 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 NKAIN3Q8N8D7 197 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 STOML3Q8TAV4 291 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 PRRT1Q99946 306 aa11.29□□□□□ -0.6
COL18A1-201ENST00000342220 OR2AT4A6NND4 320 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 PPIHO43447 177 aaKnown RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 IGHV2-5P01817 119 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 VSIG8P0DPA2 414 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 AKR1C4P17516 323 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 COTL1Q14019 142 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 GAMTQ14353 236 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 OR8G1Q15617 311 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 FBXW9Q5XUX1 488 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 DEGS2Q6QHC5 323 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 UNQ6126/PRO20091Q6UXV3 157 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 RIMS4Q9H426 269 aaPredicted RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 CDH20Q9HBT6 801 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 UQCC1Q9NVA1 299 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 ANKHD1Q8IWZ3 2542 aaKnown RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 CENPEQ02224 2701 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 LOC102725191A0A1B0GVB3 256 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 NPIPB13A6NJU9 1138 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 NPIPB4C9JG80 1138 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 OR2F2O95006 317 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 IL2RAP01589 272 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 RAB6AP20340 208 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 AGAP20933 346 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 TGFBR3Q03167 851 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 SRSF4Q08170 494 aaKnown RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 OR2F1Q13607 317 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 PPA1Q15181 289 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 RAB35Q15286 201 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 RSU1Q15404 277 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 KISS1Q15726 138 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 UBE2V2Q15819 145 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 HIST3H3Q16695 136 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 RSPO1Q2MKA7 263 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms