RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 TVP23CQ96ET8 276 aa10.1□□□□□ -0.79
ZNF648-201ENST00000339948 HIST1H2BNQ99877 126 aa10.1□□□□□ -0.79
ZNF648-201ENST00000339948 HIST1H2BMQ99879 126 aa10.1□□□□□ -0.79
ZNF648-201ENST00000339948 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
ZNF648-201ENST00000339948 MMP17Q9ULZ9 603 aa10.1□□□□□ -0.79
ZNF648-201ENST00000339948 WASF3Q9UPY6 502 aa10.1□□□□□ -0.79
ZNF648-201ENST00000339948 BLACEA4D250 179 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 GRB2P62993 217 aaKnown RBP10.09□□□□□ -0.79
ZNF648-201ENST00000339948 ZNF385CQ66K41 422 aaPredicted RBP10.09□□□□□ -0.79
ZNF648-201ENST00000339948 ALKBH2Q6NS38 261 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 CCDC71LQ8N9Z2 235 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 SLC7A10Q9NS82 523 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 C3orf85A0A1B0GTC6 90 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 FOSL2P15408 326 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 CD200P41217 278 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 CDX1P47902 265 aaPredicted RBP10.09□□□□□ -0.79
ZNF648-201ENST00000339948 NPBWR2P48146 333 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 HNRNPKP61978 463 aaKnown RBP eCLIP10.09□□□□□ -0.79
ZNF648-201ENST00000339948 TMEM187Q14656 261 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 TBC1D26Q86UD7 250 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 MRPL41Q8IXM3 137 aaKnown RBP10.09□□□□□ -0.79
ZNF648-201ENST00000339948 DMBX1Q8NFW5 382 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 OR10AD1Q8NGE0 317 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 ZNF816-ZNF321PA0A0X1KG74 233 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 SCRG1O75711 98 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 NRASP01111 189 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 GAPDHP04406 335 aaKnown RBP10.09□□□□□ -0.79
ZNF648-201ENST00000339948 SERPINE2P07093 398 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 THBS4P35443 961 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 CASP6P55212 293 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 MRPS21P82921 87 aaKnown RBP10.09□□□□□ -0.79
ZNF648-201ENST00000339948 PMP22Q01453 160 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 DPPA2Q7Z7J5 298 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 GAPTQ8N292 157 aa10.09□□□□□ -0.79
ZNF648-201ENST00000339948 TK1P04183 234 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 SPANXN5Q5MJ07 72 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 IL22RA1Q8N6P7 574 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 OXGR1Q96P68 337 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 MOB1AQ9H8S9 216 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 RNF122Q9H9V4 155 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 CCL28Q9NRJ3 127 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 HDGFL3Q9Y3E1 203 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 STRAPQ9Y3F4 350 aaKnown RBP10.08□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF318Q5VUA4 2279 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 A0A1W2PQD3 144 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 OR5H1A6NKK0 313 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF729A6NN14 1252 aaPredicted RBP10.08□□□□□ -0.8
ZNF648-201ENST00000339948 DHHO43323 396 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 IFNA10P01566 189 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 RAB1AP62820 205 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 FIP1L1Q6UN15 594 aaKnown RBP10.08□□□□□ -0.8
ZNF648-201ENST00000339948 HEPN1Q6WQI6 88 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 LYPD6Q86Y78 171 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 TMEM252Q8N6L7 170 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 TMEM171Q8WVE6 324 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 IL36RNQ9UBH0 155 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 PPP1R3CQ9UQK1 317 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 DMRT1Q9Y5R6 373 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 IGHV2-5P01817 119 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 SCTP09683 121 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 HOXA5P20719 270 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 FUT3P21217 361 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 SHBQ15464 509 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 SPINK9Q5DT21 86 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 DMRTC2Q8IXT2 367 aaPredicted RBP10.08□□□□□ -0.8
ZNF648-201ENST00000339948 C1orf87Q8N0U7 546 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 OSR2Q8N2R0 312 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 SDSLQ96GA7 329 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF488Q96MN9 340 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 TUBA4BQ9H853 241 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 TREM2Q9NZC2 230 aa10.08□□□□□ -0.8
ZNF648-201ENST00000339948 IGHV1OR21-1A0A087WYE8 117 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 IGKV3D-11A0A0A0MRZ8 115 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 PPYP01298 95 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 FOLR2P14207 255 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF133P52736 654 aaPredicted RBP10.07□□□□□ -0.8
ZNF648-201ENST00000339948 PLPPR5Q32ZL2 321 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 HLA-CQ95604 372 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 SEBOXQ9HB31 216 aaPredicted RBP10.07□□□□□ -0.8
ZNF648-201ENST00000339948 POMT1Q9Y6A1 747 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 ZFAND5O76080 213 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 SCGB1D1O95968 90 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 DEFA4P12838 97 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 NR2C1P13056 603 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 RTP5Q14D33 572 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 ELOBQ15370 118 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF468Q5VIY5 522 aaPredicted RBP10.07□□□□□ -0.8
ZNF648-201ENST00000339948 C1orf53Q5VUE5 145 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 CST9LP1Q5W188 147 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 MUCL1Q96DR8 90 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF705FA8MVS1 300 aaPredicted RBP10.07□□□□□ -0.8
ZNF648-201ENST00000339948 FAM157AC9JC47 383 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 IFNL4K9M1U5 179 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF705DP0CH99 300 aaPredicted RBP10.07□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF705BP0CI00 300 aaPredicted RBP10.07□□□□□ -0.8
ZNF648-201ENST00000339948 ZNF32P17041 273 aa10.07□□□□□ -0.8
ZNF648-201ENST00000339948 HLA-DRB3P79483 266 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms