RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CLDN18P56856 261 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 BLOC1S1P78537 153 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 DAZAP2Q15038 168 aaPredicted RBP14.02□□□□□ -0.16
LITAF-201ENST00000339430 PUSL1Q8N0Z8 303 aaKnown RBP14.02□□□□□ -0.16
LITAF-201ENST00000339430 ZFP62Q8NB50 900 aaPredicted RBP14.02□□□□□ -0.16
LITAF-201ENST00000339430 SLAMF9Q96A28 289 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 TMEM45BQ96B21 275 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 HS3ST6Q96QI5 342 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 PRRG4Q9BZD6 226 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 PRDM14Q9GZV8 571 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 MMP26Q9NRE1 261 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 IL36GQ9NZH8 169 aa14.02□□□□□ -0.16
LITAF-201ENST00000339430 ANKRD11Q6UB99 2663 aaPredicted RBP14.02□□□□□ -0.17
LITAF-201ENST00000339430 URB1O60287 2271 aaKnown RBP14.02□□□□□ -0.17
LITAF-201ENST00000339430 BCL3P20749 454 aa14.02□□□□□ -0.17
LITAF-201ENST00000339430 TMEM33P57088 247 aa14.02□□□□□ -0.17
LITAF-201ENST00000339430 IGSF11Q5DX21 431 aa14.02□□□□□ -0.17
LITAF-201ENST00000339430 TMEM88Q6PEY1 159 aa14.02□□□□□ -0.17
LITAF-201ENST00000339430 SPSB4Q96A44 273 aa14.02□□□□□ -0.17
LITAF-201ENST00000339430 HSPB6O14558 160 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 MBPP02686 304 aaPredicted RBP14.01□□□□□ -0.17
LITAF-201ENST00000339430 AADACP22760 399 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 LPAR6P43657 344 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 ID4P47928 161 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 GPM6AP51674 278 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 PRDX4Q13162 271 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 ERGIC1Q969X5 290 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 BSCL2Q96G97 398 aaPredicted RBP14.01□□□□□ -0.17
LITAF-201ENST00000339430 FGF23Q9GZV9 251 aaPredicted RBP14.01□□□□□ -0.17
LITAF-201ENST00000339430 TOR1AO14656 332 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 AGPAT2O15120 278 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 FUT3P21217 361 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 HAAOP46952 286 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 PARP12Q9H0J9 701 aaKnown RBP14.01□□□□□ -0.17
LITAF-201ENST00000339430 TLNRD1Q9H1K6 362 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 PLA2G2EQ9NZK7 142 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 IL36RNQ9UBH0 155 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 AMDHD2Q9Y303 409 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 STARD10Q9Y365 291 aa14.01□□□□□ -0.17
LITAF-201ENST00000339430 IGKV3D-15A0A087WSY6 115 aa14□□□□□ -0.17
LITAF-201ENST00000339430 TAAR5O14804 337 aa14□□□□□ -0.17
LITAF-201ENST00000339430 PHF1O43189 567 aaPredicted RBP14□□□□□ -0.17
LITAF-201ENST00000339430 SYNGR4O95473 234 aa14□□□□□ -0.17
LITAF-201ENST00000339430 HERV-K104P61576 105 aa14□□□□□ -0.17
LITAF-201ENST00000339430 PMP22Q01453 160 aa14□□□□□ -0.17
LITAF-201ENST00000339430 RNFT1Q5M7Z0 435 aa14□□□□□ -0.17
LITAF-201ENST00000339430 MEX3BQ6ZN04 569 aaKnown RBP14□□□□□ -0.17
LITAF-201ENST00000339430 OR52M1Q8NGK5 317 aa14□□□□□ -0.17
LITAF-201ENST00000339430 IGF2RP11717 2491 aa14□□□□□ -0.17
LITAF-201ENST00000339430 GLP1RP43220 463 aa14□□□□□ -0.17
LITAF-201ENST00000339430 PJVKQ0ZLH3 352 aa14□□□□□ -0.17
LITAF-201ENST00000339430 LIAT1Q6ZQX7 453 aa14□□□□□ -0.17
LITAF-201ENST00000339430 COLCA1Q6ZS62 124 aa14□□□□□ -0.17
LITAF-201ENST00000339430 MRPL21Q7Z2W9 205 aaKnown RBP14□□□□□ -0.17
LITAF-201ENST00000339430 GLYATL2Q8WU03 294 aa14□□□□□ -0.17
LITAF-201ENST00000339430 MOB3AQ96BX8 217 aa14□□□□□ -0.17
LITAF-201ENST00000339430 GALNT14Q96FL9 552 aa14□□□□□ -0.17
LITAF-201ENST00000339430 OR51B6Q9H340 312 aa14□□□□□ -0.17
LITAF-201ENST00000339430 TNRC6AQ8NDV7 1962 aaKnown RBP13.99□□□□□ -0.17
LITAF-201ENST00000339430 PRRC2CQ9Y520 2896 aaKnown RBP13.99□□□□□ -0.17
LITAF-201ENST00000339430 CST4P01036 141 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 NGFP01138 241 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 DUSP1P28562 367 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 TMEM268Q5VZI3 342 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 LDLRAD3Q86YD5 345 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 SVBPQ8N300 66 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 HPSE2Q8WWQ2 592 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 EXTL1Q92935 676 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 SMIM8Q96KF7 97 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 TECTBQ96PL2 329 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 REPIN1Q9BWE0 567 aaKnown RBP13.99□□□□□ -0.17
LITAF-201ENST00000339430 RHOFQ9HBH0 211 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 PCDHB16Q9NRJ7 776 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 ARHGAP21Q5T5U3 1957 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 ESPL1Q14674 2120 aa13.99□□□□□ -0.17
LITAF-201ENST00000339430 TRAV17A0A0B4J275 112 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 C3orf80F5H4A9 247 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 MUC1P15941 1255 aaPredicted RBP13.98□□□□□ -0.17
LITAF-201ENST00000339430 EIF5AP63241 154 aaKnown RBP13.98□□□□□ -0.17
LITAF-201ENST00000339430 TMEM211Q6ICI0 200 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 MSI2Q96DH6 328 aaKnown RBP13.98□□□□□ -0.17
LITAF-201ENST00000339430 TP53RKQ96S44 253 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 GPHA2Q96T91 129 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 LINC00470Q9BZP3 86 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 DEFB127Q9H1M4 99 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 UQCC1Q9NVA1 299 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 DKK4Q9UBT3 224 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 PQLC2LA1A4F0 135 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 PPYP01298 95 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 RAB1AP62820 205 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 SLC10A1Q14973 349 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 EIF5AL1Q6IS14 154 aaKnown RBP13.98□□□□□ -0.17
LITAF-201ENST00000339430 IL34Q6ZMJ4 242 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 ZADH2Q8N4Q0 377 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 CLRN3Q8NCR9 226 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 C18orf12Q96KH6 178 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 SYT3Q9BQG1 590 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 SUCNR1Q9BXA5 334 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 LHX6Q9UPM6 363 aa13.98□□□□□ -0.17
LITAF-201ENST00000339430 NCOR2Q9Y618 2525 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms