RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 NOL3O60936 208 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 GLAP06280 429 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 CLEC2LP0C7M8 214 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 PPIAL4GP0DN37 164 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 FUT3P21217 361 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 CFPP27918 469 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 RPS19P39019 145 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 KCNJ3P48549 501 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 SERPINB10P48595 397 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 EDDM3BP56851 147 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 VBP1P61758 197 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 RPL31P62899 125 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 RPS27AP62979 156 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 QRFPP83859 136 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 RBM39Q14498 530 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 PAN3Q58A45 887 aaKnown RBP9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 OR10K2Q6IF99 312 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 SFXN4Q6P4A7 337 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 C17orf107Q6ZR85 190 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 CLVS1Q8IUQ0 354 aaPredicted RBP9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 CMTM4Q8IZR5 234 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 OR4S1Q8NGB4 309 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 NEDD4LQ96PU5 975 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 SHARPINQ9H0F6 387 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 LPAR3Q9UBY5 353 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 DAPK2Q9UIK4 370 aa9.86□□□□□ -0.83
SPTLC1-202ENST00000337841 TRAV24A0A0B4J272 114 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 hADV38S2A0JD32 116 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 METTL21EPA6NDL7 271 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 C22orf46C9J442 243 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 PSPNO60542 156 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 FCN3O75636 299 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 GABARAPO95166 117 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 SLC2A2P11168 524 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 HNF1AP20823 631 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 ERP29P30040 261 aaKnown RBP9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 OR3A1P47881 315 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 TMBIM6P55061 237 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 NCS1P62166 190 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 PAX2Q02962 417 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 MEF2CQ06413 473 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 PAX8Q06710 450 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 BLMHQ13867 455 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 EDDM3AQ14507 147 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 CR1LQ2VPA4 569 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 IDNKQ5T6J7 187 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 USP43Q70EL4 1123 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 Q71RC1 249 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 NR2C2APQ86WQ0 139 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 FAM185AQ8N0U4 392 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 FGFRL1Q8N441 504 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 SUMF2Q8NBJ7 301 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 LY6G5BQ8NDX9 201 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 OR4M1Q8NGD0 313 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 C8orf46Q8TAG6 207 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 NEK7Q8TDX7 302 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 RAB2BQ8WUD1 216 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 Q96M66 194 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 BCL7BQ9BQE9 202 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 DPCDQ9BVM2 203 aaPredicted RBP9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 TM2D1Q9BX74 207 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 CHST6Q9GZX3 395 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 NAA50Q9GZZ1 169 aaKnown RBP9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 PPA2Q9H2U2 334 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 LIN7BQ9HAP6 207 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 TMEM160Q9NX00 188 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 PEX16Q9Y5Y5 336 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 AUP1Q9Y679 476 aa9.85□□□□□ -0.83
SPTLC1-202ENST00000337841 TMEM272A0A1B0GTI8 110 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 hCG_1809904A0A1W2PP81 198 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A1W2PPE2 198 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A1W2PR64 198 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 A0A1W2PRV1 198 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 CSN2P05814 226 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 RAB6AP20340 208 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 BLVRBP30043 206 aaPredicted RBP9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 P2RX3P56373 397 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 SCAND1P57086 179 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 ARF6P62330 175 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 AESQ08117 197 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 UNC119Q13432 240 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 CTF1Q16619 201 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 KRBOX4Q5JUW0 171 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 TMEM200BQ69YZ2 307 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 RAB12Q6IQ22 244 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 C1orf122Q6ZSJ8 110 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 SLC16A12Q6ZSM3 486 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 BPIFB2Q8N4F0 458 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 OR56B1Q8NGI3 324 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 PTX4Q96A99 478 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 ABRACLQ9P1F3 81 aa9.84□□□□□ -0.83
SPTLC1-202ENST00000337841 MED13LQ71F56 2210 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 TRGV10A0A0A0MS01 117 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 HSPB6O14558 160 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 LDLRAD4O15165 306 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 PDCD6O75340 191 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 TGFBR1P36897 503 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 RORCP51449 518 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 FAM120AOSQ5T036 256 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 METTL11BQ5VVY1 283 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms