RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HERV-K104P61576 105 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 FOXF2Q12947 444 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 HERPUD1Q15011 391 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 KRTAP27-1Q3LI81 207 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 FAM74A3Q4VXF1 159 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 PAN3Q58A45 887 aaKnown RBP7.57□□□□□ -1.2
SNCA-201ENST00000336904 FAHD2BQ6P2I3 314 aaPredicted RBP7.57□□□□□ -1.2
SNCA-201ENST00000336904 FAHD2AQ96GK7 314 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 NMES1Q9C002 83 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 ZNF286AQ9HBT8 521 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 ARPC4-TTLL3A0A0A6YYG9 625 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 PQLC2LA1A4F0 135 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 CRYM-AS1A6NIL9 109 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 B8ZZF3 427 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 TRAPPC2LH3BP13 241 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 MBPP02686 304 aaPredicted RBP7.57□□□□□ -1.2
SNCA-201ENST00000336904 HOXD4P09016 255 aaPredicted RBP7.57□□□□□ -1.2
SNCA-201ENST00000336904 FGF2P09038 288 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 FUT3P21217 361 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 ZP3P21754 424 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 SLC35G3Q8N808 338 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 OR51H1Q8NH63 302 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 FER1L6-AS2Q96M78 137 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 DHRS9Q9BPW9 319 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 PRDM14Q9GZV8 571 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 CCL28Q9NRJ3 127 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 UFSP2Q9NUQ7 469 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 C1orf123Q9NWV4 160 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 PLA2G2EQ9NZK7 142 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 FBXL17Q9UF56 701 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 ZNF318Q5VUA4 2279 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 PKDREJQ9NTG1 2253 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 TACC2O95359 2948 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 IGKV1-6A0A0C4DH72 117 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 A8MXK9 166 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 H3BP45 60 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 CDIPTO14735 213 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 PPYP01298 95 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 HLA-GP17693 338 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 NHLH2Q02577 135 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 ZNF345Q14585 488 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 GUCA2BQ16661 112 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 TMEM268Q5VZI3 342 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 PRSS54Q6PEW0 395 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 ZNF818PQ6ZRF7 136 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 WDR86Q86TI4 376 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 LDLRAD3Q86YD5 345 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 BAP18Q8IXM2 172 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 TPRX1Q8N7U7 411 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 GLYATL2Q8WU03 294 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 APOBEC3DQ96AK3 386 aaPredicted RBP7.57□□□□□ -1.2
SNCA-201ENST00000336904 TMEM45BQ96B21 275 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 LRRC46Q96FV0 321 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 HIST1H2AAQ96QV6 131 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 SH3BGRL3Q9H299 93 aa7.57□□□□□ -1.2
SNCA-201ENST00000336904 FBXO9Q9UK97 447 aaPredicted RBP7.57□□□□□ -1.2
SNCA-201ENST00000336904 WNT9BO14905 357 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 EIF3GO75821 320 aaKnown RBP eCLIP7.56□□□□□ -1.2
SNCA-201ENST00000336904 HKR1P10072 659 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 ZNF16P17020 682 aaPredicted RBP7.56□□□□□ -1.2
SNCA-201ENST00000336904 RPL12P30050 165 aaKnown RBP7.56□□□□□ -1.2
SNCA-201ENST00000336904 SRSF4Q08170 494 aaKnown RBP7.56□□□□□ -1.2
SNCA-201ENST00000336904 CLINT1Q14677 625 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 SMUG1Q53HV7 270 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 COLCA1Q6ZS62 124 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 GAPTQ8N292 157 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 RPRMLQ8N4K4 120 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 HSD17B11Q8NBQ5 300 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 FAM117AQ9C073 453 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 NAA60Q9H7X0 242 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 OR1A1Q9P1Q5 309 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 PLCE1Q9P212 2302 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 NKX2-6A6NCS4 301 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 PROB1E7EW31 1015 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 K7EPK0 472 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 ABCD4O14678 606 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 MED6O75586 246 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 CTSDP07339 412 aaPredicted RBP7.56□□□□□ -1.2
SNCA-201ENST00000336904 TPT1P13693 172 aaKnown RBP7.56□□□□□ -1.2
SNCA-201ENST00000336904 IGHV1-2P23083 117 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 AKR1C3P42330 323 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 TNFSF10P50591 281 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 TMEM33P57088 247 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 OR2B11Q5JQS5 317 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 FBXW9Q5XUX1 488 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 Q6ZSR3 168 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 FAM71E2Q8N5Q1 922 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 ZFP62Q8NB50 900 aaPredicted RBP7.56□□□□□ -1.2
SNCA-201ENST00000336904 SUMF2Q8NBJ7 301 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 OR1K1Q8NGR3 316 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 C10orf35Q96D05 121 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 KIRREL1Q96J84 757 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 SLC5A7Q9GZV3 580 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 TREM1Q9NP99 234 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 TINAGQ9UJW2 476 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 SPTA1P02549 2419 aa7.56□□□□□ -1.2
SNCA-201ENST00000336904 ANKRD30BLA7E2S9 258 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 IGHV3-13P01766 116 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 IGHV3-7P01780 117 aa7.55□□□□□ -1.2
SNCA-201ENST00000336904 ADCYAP1P18509 176 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms