RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 DNASE2O00115 360 aaPredicted RBP16.23■□□□□ 0.19
RFTN1-201ENST00000334133 PRKACAP17612 351 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 WNT5AP41221 380 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 ECI1P42126 302 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 SLC10A1Q14973 349 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 PLA2G2CQ5R387 149 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 ARL11Q969Q4 196 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 APOBEC3DQ96AK3 386 aaPredicted RBP16.23■□□□□ 0.19
RFTN1-201ENST00000334133 POM121L2Q96KW2 1035 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 LPAR3Q9UBY5 353 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 CD300LBA8K4G0 201 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 TNFSF12O43508 249 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 CCDC36Q8IYA8 594 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 GCNT2Q8N0V5 402 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 UBALD1Q8TB05 177 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 MOB3AQ96BX8 217 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 NKX6-2Q9C056 277 aaPredicted RBP16.23■□□□□ 0.19
RFTN1-201ENST00000334133 DNAJB11Q9UBS4 358 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 ARHGAP21Q5T5U3 1957 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 F8W036 122 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 BLOC1S1P78537 153 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 MYPOPQ86VE0 399 aaPredicted RBP16.23■□□□□ 0.19
RFTN1-201ENST00000334133 PUSL1Q8N0Z8 303 aaKnown RBP16.23■□□□□ 0.19
RFTN1-201ENST00000334133 SLC35G3Q8N808 338 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 TLNRD1Q9H1K6 362 aa16.23■□□□□ 0.19
RFTN1-201ENST00000334133 LINC01387J3KSC0 135 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 CA6P23280 308 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 ARG2P78540 354 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 PLP2Q04941 152 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 CEACAM21Q3KPI0 293 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 TMEM268Q5VZI3 342 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 LIAT1Q6ZQX7 453 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 MSI2Q96DH6 328 aaKnown RBP16.22■□□□□ 0.19
RFTN1-201ENST00000334133 DIDO1Q9BTC0 2240 aaKnown RBP16.22■□□□□ 0.19
RFTN1-201ENST00000334133 TRAPPC2LH3BP13 241 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 RHBDL1O75783 438 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 IL18BPO95998 194 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 CELA3BP08861 270 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 SPRR3Q9UBC9 169 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 TUBD1Q9UJT1 453 aa16.22■□□□□ 0.19
RFTN1-201ENST00000334133 RP1L1Q8IWN7 2480 aaPredicted RBP16.22■□□□□ 0.19
RFTN1-201ENST00000334133 IGKV1D-13A0A0B4J2D9 117 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 RPL36A-HNRNPH2H7BZ11 118 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 HSD17B6O14756 317 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 NME2P1O60361 137 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 ATG12O94817 140 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 IGKV1-13P0DP09 117 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 NHLH2Q02577 135 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 TMEM211Q6ICI0 200 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 FBXW12Q6X9E4 464 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 C20orf204Q6ZNR8 217 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 HIST1H2AAQ96QV6 131 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 KMT2EQ8IZD2 1858 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 TRIM77I1YAP6 450 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 SELEP16581 610 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 GNRHRP30968 328 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 HERPUD1Q15011 391 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 GTF3C1Q12789 2109 aa16.21■□□□□ 0.19
RFTN1-201ENST00000334133 A0A1B0GV50 99 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 KLRC4-KLRK1H3BQV0 150 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 CDK2AP1O14519 115 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 CLN3Q13286 438 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 STK11Q15831 433 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 MDP1Q86V88 176 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 MDS2Q8NDY4 140 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 MAGT1Q9H0U3 335 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 PCDHB16Q9NRJ7 776 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 ZDHHC8Q9ULC8 765 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 RFNGQ9Y644 331 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 MGAQ8IWI9 3026 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 FHITP49789 147 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 FGF12P61328 243 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 HOXA4Q00056 320 aaPredicted RBP16.2■□□□□ 0.18
RFTN1-201ENST00000334133 PRR18Q8N4B5 295 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 WFDC1Q9HC57 220 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 GLS2Q9UI32 602 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 KLF13Q9Y2Y9 288 aaPredicted RBP16.2■□□□□ 0.18
RFTN1-201ENST00000334133 RAB19A4D1S5 217 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 NKX2-6A6NCS4 301 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 C1QL1O75973 258 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 MUC1P15941 1255 aaPredicted RBP16.2■□□□□ 0.18
RFTN1-201ENST00000334133 APLNRP35414 380 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 ERVS71-1P61550 626 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 NRN1LQ496H8 165 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 ZNF818PQ6ZRF7 136 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 CBLN2Q8IUK8 224 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 MKXQ8IYA7 352 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 GAPTQ8N292 157 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 GALNT14Q96FL9 552 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 SYT3Q9BQG1 590 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 RHOFQ9HBH0 211 aa16.2■□□□□ 0.18
RFTN1-201ENST00000334133 C3orf85A0A1B0GTC6 90 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 TBC1D26Q86UD7 250 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 C18orf12Q96KH6 178 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 TECTBQ96PL2 329 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 IGKV1-6A0A0C4DH72 117 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 MPPED1O15442 326 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 OMGP23515 440 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 AKIRIN2Q53H80 203 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 LGI3Q8N145 548 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms