RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 LDLRAD3Q86YD5 345 aa14.61□□□□□ -0.07
PTCH1-201ENST00000331920 OR13G1Q8NGZ3 307 aa14.61□□□□□ -0.07
PTCH1-201ENST00000331920 ZNF418Q8TF45 676 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-201ENST00000331920 ZDHHC5Q9C0B5 715 aa14.61□□□□□ -0.07
PTCH1-201ENST00000331920 KCNE3Q9Y6H6 103 aa14.61□□□□□ -0.07
PTCH1-201ENST00000331920 CKAP5Q14008 2032 aa14.61□□□□□ -0.07
PTCH1-201ENST00000331920 LGALS3P17931 250 aaKnown RBP14.61□□□□□ -0.07
PTCH1-201ENST00000331920 VN1R2Q8NFZ6 395 aa14.61□□□□□ -0.07
PTCH1-201ENST00000331920 KLK15Q9H2R5 256 aa14.61□□□□□ -0.07
PTCH1-201ENST00000331920 TMEM167BQ9NRX6 74 aa14.61□□□□□ -0.07
PTCH1-201ENST00000331920 LIAT1Q6ZQX7 453 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 ZNF142P52746 1687 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-201ENST00000331920 B4DEV8 164 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 CDK5R1Q15078 307 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 NTNG2Q96CW9 530 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 IFT172Q9UG01 1749 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 METTL12A8MUP2 240 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 HS3ST2Q9Y278 367 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 OR10J1P30954 320 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 TMEM95Q3KNT9 176 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 TSPO2Q5TGU0 170 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 Q6ZSR9 355 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 DND1Q8IYX4 353 aaKnown RBP14.6□□□□□ -0.07
PTCH1-201ENST00000331920 PCGF1Q9BSM1 259 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 RTTNQ86VV8 2226 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 DLK1P80370 383 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 RPS4Y2Q8TD47 263 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 GLRX2Q9NS18 164 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 INSIG2Q9Y5U4 225 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 DIRC3C9JPN6 131 aa14.6□□□□□ -0.07
PTCH1-201ENST00000331920 HYAL3O43820 417 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-201ENST00000331920 M0QZK8 103 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 GGCTO75223 188 aaKnown RBP14.59□□□□□ -0.07
PTCH1-201ENST00000331920 CD74P04233 296 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 OTX1P32242 354 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-201ENST00000331920 KHDC3LQ587J8 217 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 MRM1Q6IN84 353 aaKnown RBP14.59□□□□□ -0.07
PTCH1-201ENST00000331920 THSD4Q6ZMP0 1018 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 ANKRD31Q8N7Z5 1873 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 C3P01024 1663 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 C9orf170A2RU37 121 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 PTGFRP43088 359 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 ZBTB37Q5TC79 503 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 EBLN2Q6P2I7 272 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 SYT8Q8NBV8 401 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 DOK1Q99704 481 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 IGHV3OR15-7A0A075B7D8 119 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 UNCXA6NJT0 531 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 HIST1H1BP16401 226 aaKnown RBP14.59□□□□□ -0.07
PTCH1-201ENST00000331920 CDX1P47902 265 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-201ENST00000331920 ZNF774Q6NX45 483 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 C19orf53Q9UNZ5 99 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-201ENST00000331920 HDGFL3Q9Y3E1 203 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 H0YIG0 161 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 NAT1P18440 290 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 HINT1P49773 126 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-201ENST00000331920 ZNF117Q03924 483 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 RELQ04864 619 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-201ENST00000331920 AFMIDQ63HM1 303 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 ADTRPQ96IZ2 230 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 LPAR3Q9UBY5 353 aa14.59□□□□□ -0.07
PTCH1-201ENST00000331920 MEOX2P50222 304 aa14.58□□□□□ -0.07
PTCH1-201ENST00000331920 PARP11Q9NR21 331 aa14.58□□□□□ -0.07
PTCH1-201ENST00000331920 DCCP43146 1447 aa14.58□□□□□ -0.07
PTCH1-201ENST00000331920 C15orf39Q6ZRI6 1047 aa14.58□□□□□ -0.07
PTCH1-201ENST00000331920 PELI3Q8N2H9 469 aa14.58□□□□□ -0.07
PTCH1-201ENST00000331920 MAS1LP35410 378 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 GFERP55789 205 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 PPP1R1AQ13522 171 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 SGMS2Q8NHU3 365 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 MMP25Q9NPA2 562 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 PRSS50Q9UI38 385 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 KRTCAP3Q53RY4 240 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 FOXO1Q12778 655 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 OR1K1Q8NGR3 316 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 MRC1P22897 1456 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 PDE6DO43924 150 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 MFAP4P55083 255 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 PYCR3Q53H96 274 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 OR4S2Q8NH73 311 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 RAB1CQ92928 201 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 R3HDM4Q96D70 268 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 EID2BQ96D98 161 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 PSMB11A5LHX3 300 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 NPIPB6E9PJ23 425 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 POLR2GP62487 172 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTCH1-201ENST00000331920 HLA-DRB3P79483 266 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 B9D1Q9UPM9 204 aa14.58□□□□□ -0.08
PTCH1-201ENST00000331920 RER1O15258 196 aa14.57□□□□□ -0.08
PTCH1-201ENST00000331920 ZNF324BQ6AW86 544 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-201ENST00000331920 OR8D4Q8NGM9 314 aa14.57□□□□□ -0.08
PTCH1-201ENST00000331920 MDH2P40926 338 aaKnown RBP14.57□□□□□ -0.08
PTCH1-201ENST00000331920 RBM11P57052 281 aaKnown RBP14.57□□□□□ -0.08
PTCH1-201ENST00000331920 WDR25Q64LD2 544 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-201ENST00000331920 FGF22Q9HCT0 170 aa14.57□□□□□ -0.08
PTCH1-201ENST00000331920 MRPS16Q9Y3D3 137 aaKnown RBP14.57□□□□□ -0.08
PTCH1-201ENST00000331920 DLX6P56179 175 aa14.57□□□□□ -0.08
PTCH1-201ENST00000331920 SPATA45Q537H7 98 aa14.57□□□□□ -0.08
PTCH1-201ENST00000331920 FOXJ3Q9UPW0 622 aa14.57□□□□□ -0.08
PTCH1-201ENST00000331920 TP53BP1Q12888 1972 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms