RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.29	□□□□□ -0.76
DDR1-223	ENST00000324771		A0A1W2PPV4	95 aa		10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	SYNGR1	O43759	233 aa		10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	LYZL2	Q7Z4W2	148 aa		10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	THNSL2	Q86YJ6	484 aa		10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	ZDHHC22	Q8N966	263 aa		10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	OR5M8	Q8NGP6	311 aa		10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	CCL28	Q9NRJ3	127 aa		10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	GPR27	Q9NS67	375 aa		10.29	□□□□□ -0.76
DDR1-223	ENST00000324771	FAM90A27P	A6NNH2	459 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	ADAM20	O43506	726 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	OPN1MW	P04001	364 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	OPN1MW2	P0DN77	364 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	OPN1MW3	P0DN78	364 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	MPG	P29372	298 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	FLI1	Q01543	452 aa	Predicted RBP	10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	ZNF260	Q3ZCT1	412 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	RPL7L1	Q6DKI1	246 aa	Known RBP	10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	H2BFWT	Q7Z2G1	175 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	OR4A16	Q8NH70	328 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	HPSE2	Q8WWQ2	592 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	C5orf63	A6NC05	138 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	PINLYP	A6NC86	204 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	HEXA	P06865	529 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	GABRA1	P14867	456 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	MZT1	Q08AG7	82 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	CLEC12B	Q2HXU8	276 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	RNF144B	Q7Z419	303 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	LRRC29	Q8WV35	223 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	CCL17	Q92583	94 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	PRELID3B	Q9Y3B1	194 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771		J3QRE1	110 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	SCAND1	P57086	179 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	TEX30	Q5JUR7	227 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	OR6S1	Q8NH40	331 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	LURAP1	Q96LR2	239 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	PRRX2	Q99811	253 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	OPN3	Q9H1Y3	402 aa	Predicted RBP	10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	PSG11	Q9UQ72	335 aa		10.28	□□□□□ -0.76
DDR1-223	ENST00000324771	TERT	O14746	1132 aa	Known RBP	10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	ACKR3	P25106	362 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	GPR12	P47775	334 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	CEBPD	P49716	269 aa	Predicted RBP	10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	GNG10	P50151	68 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	H2BFS	P57053	126 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	UNC119	Q13432	240 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	SOHLH1	Q5JUK2	328 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	BTNL3	Q6UXE8	466 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	SLC16A13	Q7RTY0	426 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	RPS4Y2	Q8TD47	263 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	GFI1	Q99684	422 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	OPA3	Q9H6K4	179 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	PLEKHA3	Q9HB20	300 aa		10.27	□□□□□ -0.76
DDR1-223	ENST00000324771	CXCL2	P19875	107 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	SRPX	P78539	464 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	SRSF6	Q13247	344 aa	Known RBP	10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	ENDOG	Q14249	297 aa	Known RBP	10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	RHEB	Q15382	184 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	SPIC	Q8N5J4	248 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	ZNF441	Q8N8Z8	693 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	SLC39A9	Q9NUM3	307 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	LRRK1	Q38SD2	2015 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	GPR31	O00270	319 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	FABP1	P07148	127 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	CTXN2	P0C2S0	81 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	HOXA1	P49639	335 aa	Predicted RBP	10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	C2orf68	Q2NKX9	166 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	SVBP	Q8N300	66 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	GALM	Q96C23	342 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	WNT5B	Q9H1J7	359 aa		10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	PURG	Q9UJV8	347 aa	Known RBP	10.27	□□□□□ -0.77
DDR1-223	ENST00000324771	BCL2L11	O43521	198 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	TMEM127	O75204	238 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	ZNF17	P17021	662 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	PEA15	Q15121	130 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	GAPT	Q8N292	157 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771		A0A1W2PNV4	684 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	RCC1	P18754	421 aa	Predicted RBP	10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	OR1S2	Q8NGQ3	325 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	NGB	Q9NPG2	151 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	SLC2A9	Q9NRM0	540 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	IGHV3OR15-7	A0A075B7D8	119 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	DHRS7C	A6NNS2	312 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	ECI1	P42126	302 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	RPS10	P46783	165 aa	Known RBP	10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	ZFP36L1	Q07352	338 aa	Known RBP	10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	C1orf100	Q5SVJ3	147 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	OR10S1	Q8NGN2	331 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	SPTBN4	Q9H254	2564 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	PTPN13	Q12923	2485 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771		A0A1W2PPE3	182 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771		E5RGE8	158 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	ACTL6A	O96019	429 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	CRH	P06850	196 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	F2RL1	P55085	397 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	IZUMO4	Q1ZYL8	232 aa		10.26	□□□□□ -0.77
DDR1-223	ENST00000324771	SLC25A42	Q86VD7	318 aa		10.26	□□□□□ -0.77

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