RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 RPS4Y2Q8TD47 263 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 SCARB1Q8WTV0 552 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 SLC25A28Q96A46 364 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 TAF9BQ9HBM6 251 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 FAM96BQ9Y3D0 163 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 CLDN1O95832 211 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 IFNA17P01571 189 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 RAG2P55895 527 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 OR2W3Q7Z3T1 314 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 LGI3Q8N145 548 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 SCGB1C1Q8TD33 95 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 DYNLRB1Q9NP97 96 aa11.76□□□□□ -0.53
SRRM1-201ENST00000323848 TMEM14DPA8MWL7 114 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 HMGB3O15347 200 aaKnown RBP11.75□□□□□ -0.53
SRRM1-201ENST00000323848 TPPPO94811 219 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 IRF2P14316 349 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 MPGP29372 298 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 POLR2GP62487 172 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRRM1-201ENST00000323848 SPANXN5Q5MJ07 72 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 ZNF610Q8N9Z0 462 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 TMEM100Q9NV29 134 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 A0A1W2PPE3 182 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 CYTIPO60759 359 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 WISP2O76076 250 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 ATG12O94817 140 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 IGFBP3P17936 291 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-201ENST00000323848 CD80P33681 288 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 NKX2-1P43699 371 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-201ENST00000323848 RPL7L1Q6DKI1 246 aaKnown RBP11.75□□□□□ -0.53
SRRM1-201ENST00000323848 GFRALQ6UXV0 394 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 AQP3Q92482 292 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 CLCC1Q96S66 551 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 C5orf66Q9H5L9 145 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 PRRG2O14669 202 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 DUS4LO95620 317 aaKnown RBP11.75□□□□□ -0.53
SRRM1-201ENST00000323848 LHX2P50458 406 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 ZNF169Q14929 603 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-201ENST00000323848 TMEM182Q6ZP80 229 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-201ENST00000323848 TCTEX1D2Q8WW35 142 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 OR10C1Q96KK4 312 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 OR5AC2Q9NZP5 309 aa11.75□□□□□ -0.53
SRRM1-201ENST00000323848 TRAV20A0A0B4J274 112 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 F8VVB4 439 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 F8VWA3 439 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 SYNGR3O43761 229 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 OR3A1P47881 315 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 AESQ08117 197 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 ANKRD55Q3KP44 614 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 PARD6AQ9NPB6 346 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 GHRLQ9UBU3 117 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 FBXO7Q9Y3I1 522 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 A0A0U1RQV5 110 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 FAM24AA6NFZ4 105 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 WNT9BO14905 357 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 LILRA1O75019 489 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 SFT2D2O95562 160 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 CEACAM6P40199 344 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 ZNF718Q3SXZ3 478 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 SLC25A42Q86VD7 318 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 GAPTQ8N292 157 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 DMBX1Q8NFW5 382 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 ARL11Q969Q4 196 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 SLC2A9Q9NRM0 540 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 WDFY3Q8IZQ1 3526 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 FIGNL2A6NMB9 653 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 ST8SIA3O43173 380 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 OPN1MWP04001 364 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 SNRNP70P08621 437 aaKnown RBP11.74□□□□□ -0.53
SRRM1-201ENST00000323848 OPN1MW2P0DN77 364 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 OPN1MW3P0DN78 364 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 ELLP55199 621 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-201ENST00000323848 CLDN18P56856 261 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 H3F3AP84243 136 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 AANATQ16613 207 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 PNLIPRP3Q17RR3 467 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 SPAG16Q8N0X2 631 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 TMEM54Q969K7 222 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 C2orf50Q96LR7 162 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 C12orf57Q99622 126 aa11.74□□□□□ -0.53
SRRM1-201ENST00000323848 A0A1W2PNU3 283 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-201ENST00000323848 FPR2P25090 351 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 P2RY4P51582 365 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 UBA52P62987 128 aaKnown RBP11.73□□□□□ -0.53
SRRM1-201ENST00000323848 SLC25A53Q5H9E4 307 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 FAM201AQ5SY85 155 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 BAP18Q8IXM2 172 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 SPICQ8N5J4 248 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 PRO3102Q9H379 93 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 KIF25Q9UIL4 384 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 NSG2Q9Y328 171 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 F12P00748 615 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-201ENST00000323848 IFNA5P01569 189 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 ZCCHC24Q8N2G6 241 aaKnown RBP11.73□□□□□ -0.53
SRRM1-201ENST00000323848 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-201ENST00000323848 NABP1Q96AH0 204 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 WASF3Q9UPY6 502 aa11.73□□□□□ -0.53
SRRM1-201ENST00000323848 ATP23Q9Y6H3 246 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms