RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MS4A18Q3C1V0 323 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 OR4A4PQ8NGN8 299 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 OR4F5Q8NH21 305 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 OR10D3Q8NH80 312 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 APH1AQ96BI3 265 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 OR4F4Q96R69 305 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 GFI1Q99684 422 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 NMES1Q9C002 83 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 COA4Q9NYJ1 87 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 IGLV1-36A0A0B4J1U3 117 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 DDTP30046 118 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 UBE2V2Q15819 145 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 OR13D1Q8NGV5 346 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 PRR14LQ5THK1 2151 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 LYPD3O95274 346 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 FABP6P51161 128 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 ANKRD55Q3KP44 614 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 PIGYQ3MUY2 71 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 STPG1Q5TH74 334 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 NCR3LG1Q68D85 454 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 TGIF2LXQ8IUE1 241 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 CYB561D1Q8N8Q1 229 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 TMEM18Q96B42 140 aa13.38□□□□□ -0.27
VARS2-201ENST00000321897 CLDN34H7C241 214 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 CBR3O75828 277 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 CD200P41217 278 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 C6orf15Q6UXA7 325 aaPredicted RBP13.37□□□□□ -0.27
VARS2-201ENST00000321897 UNQ9370/PRO34162Q6UXP9 181 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 TGIF2-C20orf24A0A0A6YYL0 155 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 DVL1O14640 695 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 ADAM19Q9H013 955 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 CBY1Q9Y3M2 126 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 FTCDNL1E5RQL4 147 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 DXOO77932 396 aaKnown RBP13.37□□□□□ -0.27
VARS2-201ENST00000321897 HTD2P86397 168 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 KCNIP4Q6PIL6 250 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 TWSG1Q9GZX9 223 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 SH3BGRL3Q9H299 93 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 KCNIP1Q9NZI2 227 aa13.37□□□□□ -0.27
VARS2-201ENST00000321897 A0A1W2PPV4 95 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 CBY3A6NI87 242 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 NPIPB9F8W1W9 429 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 VAMP5O95183 116 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 CD74P04233 296 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 PLAURQ03405 335 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 BAXQ07812 192 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 CLN3Q13286 438 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 GGTLC2Q14390 218 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 DEFB108BQ8NET1 73 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 TIMM10BQ9Y5J6 103 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 ZNF320A2RRD8 509 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 ZNF732B4DXR9 585 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 UBE2G2P60604 165 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 TMEM267Q0VDI3 215 aaPredicted RBP13.36□□□□□ -0.27
VARS2-201ENST00000321897 EIF4E3Q8N5X7 224 aaKnown RBP13.36□□□□□ -0.27
VARS2-201ENST00000321897 RNF133Q8WVZ7 376 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 V9GYS6 101 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 IGKV3-11P04433 115 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 NTF3P20783 257 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 CHRNA7P36544 502 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 DBX2Q6ZNG2 339 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 MYPOPQ86VE0 399 aaPredicted RBP13.36□□□□□ -0.27
VARS2-201ENST00000321897 GPR87Q9BY21 358 aa13.36□□□□□ -0.27
VARS2-201ENST00000321897 DENND4CQ5VZ89 1909 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 A0A0J9YW62 118 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 PGA4P0DJD7 388 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 PGA5P0DJD9 388 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 AADACP22760 399 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 SULT1A2P50226 295 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 WDR25Q64LD2 544 aaPredicted RBP13.35□□□□□ -0.27
VARS2-201ENST00000321897 KMT5CQ86Y97 462 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 OR1F12Q8NHA8 337 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 RFESDQ8TAC1 157 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 NDUFA2O43678 99 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 ADCYAP1P18509 176 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 NOVA1P51513 510 aaKnown RBP13.35□□□□□ -0.27
VARS2-201ENST00000321897 OR8G1Q15617 311 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 ZNF468Q5VIY5 522 aaPredicted RBP13.35□□□□□ -0.27
VARS2-201ENST00000321897 OR2C3Q8N628 320 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 UCK1Q9HA47 277 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 PARP11Q9NR21 331 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 SPINK4O60575 86 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 TNFSF15O95150 251 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 RAC2P15153 192 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 ACKR3P25106 362 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 EDDM3BP56851 147 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 FIP1L1Q6UN15 594 aaKnown RBP13.35□□□□□ -0.27
VARS2-201ENST00000321897 RTN4RL2Q86UN3 420 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 BSCL2Q96G97 398 aaPredicted RBP13.35□□□□□ -0.27
VARS2-201ENST00000321897 BTF3L4Q96K17 158 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 ELOVL1Q9BW60 279 aa13.35□□□□□ -0.27
VARS2-201ENST00000321897 PRF1P14222 555 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 HLA-DRB3P79483 266 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 TGFBR3Q03167 851 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 PLPPR5Q32ZL2 321 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 CDCP2Q5VXM1 449 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 ZNF488Q96MN9 340 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 TREM2Q9NZC2 230 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 TRBV5-5A0A0J9YX44 114 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 A0A1W2PR77 199 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms