RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 RTN4IP1Q8WWV3 396 aaPredicted RBP6.47□□□□□ -1.37
IFT88-201ENST00000319980 ST8SIA2Q92186 375 aa6.47□□□□□ -1.37
IFT88-201ENST00000319980 WNT2BQ93097 391 aa6.47□□□□□ -1.37
IFT88-201ENST00000319980 C1orf123Q9NWV4 160 aa6.47□□□□□ -1.37
IFT88-201ENST00000319980 SHANK1Q9Y566 2161 aa6.47□□□□□ -1.37
IFT88-201ENST00000319980 AKAP13Q12802 2813 aa6.47□□□□□ -1.37
IFT88-201ENST00000319980 CRYM-AS1A6NIL9 109 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 I3L521 148 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 GLP1RP43220 463 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 UCP2P55851 309 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 PLEKHN1Q494U1 663 aaPredicted RBP6.46□□□□□ -1.37
IFT88-201ENST00000319980 ACSF3Q4G176 576 aaPredicted RBP6.46□□□□□ -1.37
IFT88-201ENST00000319980 FOXRED2Q8IWF2 684 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 CCDC36Q8IYA8 594 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 RELL2Q8NC24 303 aaPredicted RBP6.46□□□□□ -1.37
IFT88-201ENST00000319980 OR1J1Q8NGS3 322 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 SLC25A40Q8TBP6 338 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 RDH5Q92781 318 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 KIF25Q9UIL4 384 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 LHX6Q9UPM6 363 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 KCNIP3Q9Y2W7 256 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 AUP1Q9Y679 476 aa6.46□□□□□ -1.37
IFT88-201ENST00000319980 RP1L1Q8IWN7 2480 aaPredicted RBP6.46□□□□□ -1.37
IFT88-201ENST00000319980 F5H0A9 414 aaPredicted RBP6.46□□□□□ -1.38
IFT88-201ENST00000319980 TEX46H3BTG2 121 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 BET1O15155 118 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 SCTP09683 121 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 PMELP40967 661 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 RAB32Q13637 225 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 MPV17LQ2QL34 196 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 FAM74A1Q5RGS3 127 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 INO80CQ6PI98 192 aaPredicted RBP6.46□□□□□ -1.38
IFT88-201ENST00000319980 UNQ6126/PRO20091Q6UXV3 157 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 FBXW12Q6X9E4 464 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 FAM58AQ8N1B3 248 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 CXorf58Q96LI9 332 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 C2orf50Q96LR7 162 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 DHRS9Q9BPW9 319 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 OR51I2Q9H344 312 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 SLC2A9Q9NRM0 540 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 DKK4Q9UBT3 224 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 TNRC6AQ8NDV7 1962 aaKnown RBP6.46□□□□□ -1.38
IFT88-201ENST00000319980 AHRRA9YTQ3 701 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 PRSS44E7EML9 344 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 BCL2L11O43521 198 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 NAPSAO96009 420 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 PPYP01298 95 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 OR5AC1P0C628 307 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 AADACP22760 399 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 P2RX3P56373 397 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 S100A10P60903 97 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 HERV-K104P61576 105 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 IL24Q13007 206 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 PSG7Q13046 419 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 RBM39Q14498 530 aaKnown RBP6.46□□□□□ -1.38
IFT88-201ENST00000319980 IAH1Q2TAA2 248 aaPredicted RBP6.46□□□□□ -1.38
IFT88-201ENST00000319980 TOR2AQ5JU69 321 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 THOC7Q6I9Y2 204 aaKnown RBP6.46□□□□□ -1.38
IFT88-201ENST00000319980 OR2A2Q6IF42 318 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 ZNF610Q8N9Z0 462 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 SUMF2Q8NBJ7 301 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 OR11L1Q8NGX0 322 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 RRNAD1Q96FB5 475 aaKnown RBP6.46□□□□□ -1.38
IFT88-201ENST00000319980 DMRTA2Q96SC8 542 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 PLK3Q9H4B4 646 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 OR5AC2Q9NZP5 309 aa6.46□□□□□ -1.38
IFT88-201ENST00000319980 RCC2Q9P258 522 aaKnown RBP6.46□□□□□ -1.38
IFT88-201ENST00000319980 PTPRBP23467 1997 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 TUBAL3A6NHL2 446 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 J3QW42 95 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 CDIPTO14735 213 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 WDR1O75083 606 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 CNOT4O95628 575 aaKnown RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 TK1P04183 234 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 ZNF44P15621 663 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 SELEP16581 610 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 UBA52P62987 128 aaKnown RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 MOB3AQ96BX8 217 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 RTL8AQ9BWD3 113 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 OPN3Q9H1Y3 402 aaPredicted RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 Q9N2K0 584 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 ARHGAP21Q5T5U3 1957 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 PRR14LQ5THK1 2151 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 DMXL2Q8TDJ6 3036 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 TRBV6-7A0A0A0MS04 114 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 K7EM74 188 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 TNFSF13O75888 250 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 IFNA21P01568 189 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 IGKV3-15P01624 115 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 RAC2P15153 192 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 ZNF250P15622 560 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 CBR1P16152 277 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 COX5AP20674 150 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 RGS7BPQ6MZT1 257 aaPredicted RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 IGFL3Q6UXB1 125 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 C20orf204Q6ZNR8 217 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 WDR86Q86TI4 376 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 CXorf67Q86X51 503 aaPredicted RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 WDR31Q8NA23 367 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms